| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758851
Identifier: 108758851
GI number: 108758851
Start: 5660241
End: 5662502
Strand: Direct
Name: 108758851
Synonym: MXAN_4539
Alternate gene names: NA
Gene position: 5660241-5662502 (Clockwise)
Preceding gene: 108758007
Following gene: 108758750
Centisome position: 61.93
GC content: 65.78
Gene sequence:
>2262_bases ATGAGCATGGCTGACGACGGCAGGGGGCAACGCGCGCCGGGTGCCGGGACTTTCCGGGGACAACCCGCCGCATCAGGACA GGCTGCGACCCGGTCTGGTGGCGTGTCGGAGGATCCAGGCAATTGGGGCGATCCACCGCCCGGCCACCGCGCGGCGGGAA ATGGACCGTTCAGGCCAGAGGCGAGGCCCACCAACGGGCCCACACGCCCCGTCCCCATGCCAGGCATGGGCGTTGGCGGG CCGCCGCCCGGGAAGAATGGTCAGCACCGCGCTGTCCCCACGGCGGCAGCACCTGTCATGAATGGCAAGGCCCCTGGGCC CGTGTCCCCGCGGGAGCCTGACAGTGCGGTCGTTCGACCGACCCCAACAAAGACGCTGCACGAGCTCGACGAACTCAGGA ACCAGGCCCATACCGGTCCCCAGGTGGATCCAGAGCTGGCAGCGGCGGTGGGATTCACCCACTTCGACGTCACCTCCAGC CAGGACAACCTCATCACCGTGCTGCTCACGCGTGAGGATTTGCACCTGCTCGCGTCCCAGACGCTGGTCCGGGTGAGGTC GAGGGAAGACAACCGCGCCTACCTGGGCGTCGTCGTGCGGGGCCCCTTCGCGGAACCGAACGCGGTGCCCGCCAACTCCA CCATGGCCATTGGCGTGGTCACCCACGGCAAGAAGCTGGCGTACACATTCGACTATCACGGGCGCGCGGAGATTGAGATT GTCGGAGAGGAAGTCGAAGGCACGCTGAAGCCTCCCCGCTTCCGGCCCCGGCCGCAGAGCCCCGTCTTCCTGCTCGACGA GGCGGAGAGCGCTCGCGTGCTGGGCGTCGGCGGCGACATGTGCCTGGGGCTGGTGGTCGGGTACGAAAAGATGGAGGCCC GGCTCAATCCCCGGGACAAATCCATCCTCCCACGCCACACGGGCATCATCGGAACAACCGGCGGCGGCAAGTCCACCACG GTGGCCACGCTCATCCACCGAGCCCAAGCGGATGGCATCGCGACCATCGTCTTCGACGTGGAGGGTGAATACACGCACGT GGACCAGCCCACCGACCATGCCGCCATGCTCGAGGCGCTCAAACGGCGAGGCCAGCGTCCGCAGGGCGTCAAGGACTTGC ACATCCACCACCTCACCGGGCGCGACAGCCTCAATCCGCGACACCGGAACAAGCACGCCTTCTCGCTCAAGTTCTCCAGC CTGTCTCCGTACGCGCTCGCGGAGATTCTCGACATGTCGGACGCACAGCAGGAGCGGTTCCTCAAGGCCTACGACGTCAC CAAGCTCTTGCTCGAAGACTTCAACATCTACCCGCAGACGGAAGAAGAGCGCCGCCAGGTCCTCGACGTGGACGAATTGT CCACGGGCTTTCCCCACATGACCATCGACCACGTGCTGGACGTGGTCAGCGCGTACATCTACAGCCTCAGTGACGAAGGC AAATCGGAGACGCGTGGAAGGTCACGCGCCACCCCTCGGAAGCAGGCGTCCCTGCTCGAGGAGAACGACGACGCGGAGGC CGACCCGGACGTCACGGCCAAGGCGCCATCGCGCGGACTGATGCTCCGCACCGAGTTCAAGAGCAACTTCGGCCGGGTCA TGGCGCGCGTCATGGCCCAGAGCAGCCGGCACGAAATCAGTTGGAAGGCCCTGGCCAGCAAACTCCACCGGCTGCGGCGC CTGGGCATCTTCGACGTGGGTAACGAGCAAGGCGTGGCCTATGAGTCCATGCTCACACCCGGGCGCGTCTCCGTCATCGA CCTGTCGGACACGGACTCACCGCAGCTCAACAACCTGGTCATCGCAGACATCCTGCGAGGCCTCCAGGAAGCGCAGGAGC GACGCTACGAGCGGGCCAACGCGAAGGACCAATCGGTCACGCCGGTCCTCATCATCATCGAAGAGGCCCACGAGTTCCTC TCCGCGAACCGAATTGCCCAGATGCCCGTGCTCTTCGAGCAGGTGGCGAAGATCGCCAAGCGGGGCCGCAAGCGCTGGAT GGGGCTCGTCTTCGTCACCCAGCTTCCACAGCACCTGCCCAACGAGGTGCTGGGCCTCATCAACAACTTCGTCATCCACA AGATCGCCGACAGCTCGGTCATCTCGCGCATGCAGAAAACCGCGGGCAGCATCGACGAGAGCCTCTGGAACCGGGTGTCA CGGTTGGCCCCCGGTCAGGCACTGGTGTCGTTCAGCAACTTCACCCGGCCGCTGATGGTCGCGGTGGACCCCGCACCGGT GAAGCGGCTGTTGGTGGAGTGA
Upstream 100 bases:
>100_bases GGATGGGTTCATGGGCCTCGTGCATGACGCCTATGCCCAGGCAGGAGCCAACCTCGAGTTCTTCAACGAGCACAGCAAGC GCCATTAGGCCAGGGGGACC
Downstream 100 bases:
>100_bases CACGCGCCCCGCGTTTCTTCCTCCTGACACCTTGGGTGCGGGGGGATTGGACGCGTGGGCCAGCCCTGGCCAGAAAGCGG ACATGAACCGACGCATGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Bipolar DNA Helicase
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MSMADDGRGQRAPGAGTFRGQPAASGQAATRSGGVSEDPGNWGDPPPGHRAAGNGPFRPEARPTNGPTRPVPMPGMGVGG PPPGKNGQHRAVPTAAAPVMNGKAPGPVSPREPDSAVVRPTPTKTLHELDELRNQAHTGPQVDPELAAAVGFTHFDVTSS QDNLITVLLTREDLHLLASQTLVRVRSREDNRAYLGVVVRGPFAEPNAVPANSTMAIGVVTHGKKLAYTFDYHGRAEIEI VGEEVEGTLKPPRFRPRPQSPVFLLDEAESARVLGVGGDMCLGLVVGYEKMEARLNPRDKSILPRHTGIIGTTGGGKSTT VATLIHRAQADGIATIVFDVEGEYTHVDQPTDHAAMLEALKRRGQRPQGVKDLHIHHLTGRDSLNPRHRNKHAFSLKFSS LSPYALAEILDMSDAQQERFLKAYDVTKLLLEDFNIYPQTEEERRQVLDVDELSTGFPHMTIDHVLDVVSAYIYSLSDEG KSETRGRSRATPRKQASLLEENDDAEADPDVTAKAPSRGLMLRTEFKSNFGRVMARVMAQSSRHEISWKALASKLHRLRR LGIFDVGNEQGVAYESMLTPGRVSVIDLSDTDSPQLNNLVIADILRGLQEAQERRYERANAKDQSVTPVLIIIEEAHEFL SANRIAQMPVLFEQVAKIAKRGRKRWMGLVFVTQLPQHLPNEVLGLINNFVIHKIADSSVISRMQKTAGSIDESLWNRVS RLAPGQALVSFSNFTRPLMVAVDPAPVKRLLVE
Sequences:
>Translated_753_residues MSMADDGRGQRAPGAGTFRGQPAASGQAATRSGGVSEDPGNWGDPPPGHRAAGNGPFRPEARPTNGPTRPVPMPGMGVGG PPPGKNGQHRAVPTAAAPVMNGKAPGPVSPREPDSAVVRPTPTKTLHELDELRNQAHTGPQVDPELAAAVGFTHFDVTSS QDNLITVLLTREDLHLLASQTLVRVRSREDNRAYLGVVVRGPFAEPNAVPANSTMAIGVVTHGKKLAYTFDYHGRAEIEI VGEEVEGTLKPPRFRPRPQSPVFLLDEAESARVLGVGGDMCLGLVVGYEKMEARLNPRDKSILPRHTGIIGTTGGGKSTT VATLIHRAQADGIATIVFDVEGEYTHVDQPTDHAAMLEALKRRGQRPQGVKDLHIHHLTGRDSLNPRHRNKHAFSLKFSS LSPYALAEILDMSDAQQERFLKAYDVTKLLLEDFNIYPQTEEERRQVLDVDELSTGFPHMTIDHVLDVVSAYIYSLSDEG KSETRGRSRATPRKQASLLEENDDAEADPDVTAKAPSRGLMLRTEFKSNFGRVMARVMAQSSRHEISWKALASKLHRLRR LGIFDVGNEQGVAYESMLTPGRVSVIDLSDTDSPQLNNLVIADILRGLQEAQERRYERANAKDQSVTPVLIIIEEAHEFL SANRIAQMPVLFEQVAKIAKRGRKRWMGLVFVTQLPQHLPNEVLGLINNFVIHKIADSSVISRMQKTAGSIDESLWNRVS RLAPGQALVSFSNFTRPLMVAVDPAPVKRLLVE >Mature_752_residues SMADDGRGQRAPGAGTFRGQPAASGQAATRSGGVSEDPGNWGDPPPGHRAAGNGPFRPEARPTNGPTRPVPMPGMGVGGP PPGKNGQHRAVPTAAAPVMNGKAPGPVSPREPDSAVVRPTPTKTLHELDELRNQAHTGPQVDPELAAAVGFTHFDVTSSQ DNLITVLLTREDLHLLASQTLVRVRSREDNRAYLGVVVRGPFAEPNAVPANSTMAIGVVTHGKKLAYTFDYHGRAEIEIV GEEVEGTLKPPRFRPRPQSPVFLLDEAESARVLGVGGDMCLGLVVGYEKMEARLNPRDKSILPRHTGIIGTTGGGKSTTV ATLIHRAQADGIATIVFDVEGEYTHVDQPTDHAAMLEALKRRGQRPQGVKDLHIHHLTGRDSLNPRHRNKHAFSLKFSSL SPYALAEILDMSDAQQERFLKAYDVTKLLLEDFNIYPQTEEERRQVLDVDELSTGFPHMTIDHVLDVVSAYIYSLSDEGK SETRGRSRATPRKQASLLEENDDAEADPDVTAKAPSRGLMLRTEFKSNFGRVMARVMAQSSRHEISWKALASKLHRLRRL GIFDVGNEQGVAYESMLTPGRVSVIDLSDTDSPQLNNLVIADILRGLQEAQERRYERANAKDQSVTPVLIIIEEAHEFLS ANRIAQMPVLFEQVAKIAKRGRKRWMGLVFVTQLPQHLPNEVLGLINNFVIHKIADSSVISRMQKTAGSIDESLWNRVSR LAPGQALVSFSNFTRPLMVAVDPAPVKRLLVE
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82341; Mature: 82210
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMADDGRGQRAPGAGTFRGQPAASGQAATRSGGVSEDPGNWGDPPPGHRAAGNGPFRPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARPTNGPTRPVPMPGMGVGGPPPGKNGQHRAVPTAAAPVMNGKAPGPVSPREPDSAVVRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEECC TPTKTLHELDELRNQAHTGPQVDPELAAAVGFTHFDVTSSQDNLITVLLTREDLHLLASQ CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCCCCCEEEEEEECHHHHHHHHH TLVRVRSREDNRAYLGVVVRGPFAEPNAVPANSTMAIGVVTHGKKLAYTFDYHGRAEIEI HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCEEEEEE VGEEVEGTLKPPRFRPRPQSPVFLLDEAESARVLGVGGDMCLGLVVGYEKMEARLNPRDK ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC SILPRHTGIIGTTGGGKSTTVATLIHRAQADGIATIVFDVEGEYTHVDQPTDHAAMLEAL CCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCHHHHHHHHH KRRGQRPQGVKDLHIHHLTGRDSLNPRHRNKHAFSLKFSSLSPYALAEILDMSDAQQERF HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHH LKAYDVTKLLLEDFNIYPQTEEERRQVLDVDELSTGFPHMTIDHVLDVVSAYIYSLSDEG HHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC KSETRGRSRATPRKQASLLEENDDAEADPDVTAKAPSRGLMLRTEFKSNFGRVMARVMAQ CHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH SSRHEISWKALASKLHRLRRLGIFDVGNEQGVAYESMLTPGRVSVIDLSDTDSPQLNNLV HCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCH IADILRGLQEAQERRYERANAKDQSVTPVLIIIEEAHEFLSANRIAQMPVLFEQVAKIAK HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RGRKRWMGLVFVTQLPQHLPNEVLGLINNFVIHKIADSSVISRMQKTAGSIDESLWNRVS HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLAPGQALVSFSNFTRPLMVAVDPAPVKRLLVE HCCCCHHHHHHHCCCCCEEEEECCHHHHHHHCC >Mature Secondary Structure SMADDGRGQRAPGAGTFRGQPAASGQAATRSGGVSEDPGNWGDPPPGHRAAGNGPFRPE CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARPTNGPTRPVPMPGMGVGGPPPGKNGQHRAVPTAAAPVMNGKAPGPVSPREPDSAVVRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEECC TPTKTLHELDELRNQAHTGPQVDPELAAAVGFTHFDVTSSQDNLITVLLTREDLHLLASQ CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCCCCCEEEEEEECHHHHHHHHH TLVRVRSREDNRAYLGVVVRGPFAEPNAVPANSTMAIGVVTHGKKLAYTFDYHGRAEIEI HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCEEEEEE VGEEVEGTLKPPRFRPRPQSPVFLLDEAESARVLGVGGDMCLGLVVGYEKMEARLNPRDK ECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC SILPRHTGIIGTTGGGKSTTVATLIHRAQADGIATIVFDVEGEYTHVDQPTDHAAMLEAL CCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCCHHHHHHHHH KRRGQRPQGVKDLHIHHLTGRDSLNPRHRNKHAFSLKFSSLSPYALAEILDMSDAQQERF HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHH LKAYDVTKLLLEDFNIYPQTEEERRQVLDVDELSTGFPHMTIDHVLDVVSAYIYSLSDEG HHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC KSETRGRSRATPRKQASLLEENDDAEADPDVTAKAPSRGLMLRTEFKSNFGRVMARVMAQ CHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH SSRHEISWKALASKLHRLRRLGIFDVGNEQGVAYESMLTPGRVSVIDLSDTDSPQLNNLV HCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCH IADILRGLQEAQERRYERANAKDQSVTPVLIIIEEAHEFLSANRIAQMPVLFEQVAKIAK HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RGRKRWMGLVFVTQLPQHLPNEVLGLINNFVIHKIADSSVISRMQKTAGSIDESLWNRVS HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLAPGQALVSFSNFTRPLMVAVDPAPVKRLLVE HCCCCHHHHHHHCCCCCEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA