| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758558
Identifier: 108758558
GI number: 108758558
Start: 6779804
End: 6780994
Strand: Reverse
Name: 108758558
Synonym: MXAN_5450
Alternate gene names: NA
Gene position: 6780994-6779804 (Counterclockwise)
Preceding gene: 108757125
Following gene: 108757638
Centisome position: 74.19
GC content: 68.18
Gene sequence:
>1191_bases ATGTCGTTCCCTGTTGTCAAGGCAGCGAACGTGAAGGGAATGGGGTGGAGCGCGGTGCTGCTGGCCGGTCTGGTTGGCTG TGGACAGGAGGCGCGGAAGCCGGCGCCCGAACAGGAAGCCATCGAGGCCGTGAAGGCGCAGGCGCAGCAGCTCCAACCTC CCGCGGGCTGCACCGAAATCACGATGGGGGAACTGGCCAACGGCATCGGGCTGACGCCGACGATGTACTCACCGCAGCCG ACGTACCGCGGCAACTTCAACAACTTTGGCGACCCGGCGTTCCCGGACCCGGCGCGCATCCGCCTGGACGTGAACACGGC GCCCGGCGTGTATGACCTGTCCGTGGGTGGAGGCAACACCTTCACCTGTGATCGCTGCGTCTTCGGCTACCAGGATGAGG GCTCGCCCGCGGAGAAGTTCTTCGTCGCCGACGCGGGCACGCTCCTGCTCGCCGTGAAGGTGTCGCCGCAGCAGACCCTT GGCGCGCTGACGAACGTGACGCTGCGTGAGTCGGTGGATGCCCCGCCCCTCAACGCGCCGTACTGGGGCAGCGCGGTGGT TCCGGGCGGCGAGTGCCGGTGGATTCGCTTCGCGACGTGGAACACGGTGCGCCAGGACGGGTGCGACCCTCGCCAGGGCT CGCTGACGGCGAACCTGCCGGACACCACCTGCGTCCCGAATGACTACGTCGCCTCCGACGGCACGCTGGAGCGCGCGCTG GGGACCCAGGTCCAGGGAGAGGCCTGCACGAAGACCGCGGCGGCGAGCGAGTCCGAACTGGCCTCGACGGATTGCGAGCA GGGCTTCGCCTGCACCGACCTGCTGTCGGAGAACGCCCAGTGCCTCAAGACGTGTGACTTCATGGCGCCCAACCCCGGCT GCCCCTCCGGCACCATGTGCGGCGTGTACGGCCTGTGCACCGAGCAGTCCGTCCTCGAGCAGAACGGCTTCACGTTCGAC CCCGCGCTGACTGGTGAGATCTGCAGCCTGGAATTCGCGCATTACTGTGGCACCGAGGGCGCGCGTGGTGTGTGTGCCGA CCTGAACCGCGACGGCAAGGGCGAGTGCTACCCCTACCACCGCGCCCGCTCCGAGTGTGGCCCGGGCGATGAGCTGGGTT ACATGAACTACGCGCTCTCCGGTGGCGGCTTCGACCGCGGCCACGGCTTCTGCTACCACGACGGCCTCTAG
Upstream 100 bases:
>100_bases GCGCTGCTTCACCTACATCACGTGAATTGGCGTTCACCAGGTCCCGGCGCGTCCGGGCAGAGAAACTCAGACATCGTCTG AGGGGAATCGGAGACACGAT
Downstream 100 bases:
>100_bases CCTTCTCCGCCATTGCCCGGTCCCTCACGTGGGCCGGGCAGTGGTGCCTTCCAGGGCGGCGCCATGAGGGGGAATCTGGC CACACTGTTGCTGGAGGCAG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSFPVVKAANVKGMGWSAVLLAGLVGCGQEARKPAPEQEAIEAVKAQAQQLQPPAGCTEITMGELANGIGLTPTMYSPQP TYRGNFNNFGDPAFPDPARIRLDVNTAPGVYDLSVGGGNTFTCDRCVFGYQDEGSPAEKFFVADAGTLLLAVKVSPQQTL GALTNVTLRESVDAPPLNAPYWGSAVVPGGECRWIRFATWNTVRQDGCDPRQGSLTANLPDTTCVPNDYVASDGTLERAL GTQVQGEACTKTAAASESELASTDCEQGFACTDLLSENAQCLKTCDFMAPNPGCPSGTMCGVYGLCTEQSVLEQNGFTFD PALTGEICSLEFAHYCGTEGARGVCADLNRDGKGECYPYHRARSECGPGDELGYMNYALSGGGFDRGHGFCYHDGL
Sequences:
>Translated_396_residues MSFPVVKAANVKGMGWSAVLLAGLVGCGQEARKPAPEQEAIEAVKAQAQQLQPPAGCTEITMGELANGIGLTPTMYSPQP TYRGNFNNFGDPAFPDPARIRLDVNTAPGVYDLSVGGGNTFTCDRCVFGYQDEGSPAEKFFVADAGTLLLAVKVSPQQTL GALTNVTLRESVDAPPLNAPYWGSAVVPGGECRWIRFATWNTVRQDGCDPRQGSLTANLPDTTCVPNDYVASDGTLERAL GTQVQGEACTKTAAASESELASTDCEQGFACTDLLSENAQCLKTCDFMAPNPGCPSGTMCGVYGLCTEQSVLEQNGFTFD PALTGEICSLEFAHYCGTEGARGVCADLNRDGKGECYPYHRARSECGPGDELGYMNYALSGGGFDRGHGFCYHDGL >Mature_395_residues SFPVVKAANVKGMGWSAVLLAGLVGCGQEARKPAPEQEAIEAVKAQAQQLQPPAGCTEITMGELANGIGLTPTMYSPQPT YRGNFNNFGDPAFPDPARIRLDVNTAPGVYDLSVGGGNTFTCDRCVFGYQDEGSPAEKFFVADAGTLLLAVKVSPQQTLG ALTNVTLRESVDAPPLNAPYWGSAVVPGGECRWIRFATWNTVRQDGCDPRQGSLTANLPDTTCVPNDYVASDGTLERALG TQVQGEACTKTAAASESELASTDCEQGFACTDLLSENAQCLKTCDFMAPNPGCPSGTMCGVYGLCTEQSVLEQNGFTFDP ALTGEICSLEFAHYCGTEGARGVCADLNRDGKGECYPYHRARSECGPGDELGYMNYALSGGGFDRGHGFCYHDGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41829; Mature: 41698
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPVVKAANVKGMGWSAVLLAGLVGCGQEARKPAPEQEAIEAVKAQAQQLQPPAGCTEI CCCCCEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCE TMGELANGIGLTPTMYSPQPTYRGNFNNFGDPAFPDPARIRLDVNTAPGVYDLSVGGGNT EHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCE FTCDRCVFGYQDEGSPAEKFFVADAGTLLLAVKVSPQQTLGALTNVTLRESVDAPPLNAP EEECCEEECCCCCCCHHHEEEEECCCEEEEEEEECCHHHHHHHHCCHHHHCCCCCCCCCC YWGSAVVPGGECRWIRFATWNTVRQDGCDPRQGSLTANLPDTTCVPNDYVASDGTLERAL CCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCEEECCCCCCCCCCCEECCCCHHHHHH GTQVQGEACTKTAAASESELASTDCEQGFACTDLLSENAQCLKTCDFMAPNPGCPSGTMC CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC GVYGLCTEQSVLEQNGFTFDPALTGEICSLEFAHYCGTEGARGVCADLNRDGKGECYPYH CEEECCCCHHHHHCCCCEECCCCCCCHHHEEHHHHCCCCCCCCEEECCCCCCCCCCCCHH RARSECGPGDELGYMNYALSGGGFDRGHGFCYHDGL HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC >Mature Secondary Structure SFPVVKAANVKGMGWSAVLLAGLVGCGQEARKPAPEQEAIEAVKAQAQQLQPPAGCTEI CCCCEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCE TMGELANGIGLTPTMYSPQPTYRGNFNNFGDPAFPDPARIRLDVNTAPGVYDLSVGGGNT EHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCE FTCDRCVFGYQDEGSPAEKFFVADAGTLLLAVKVSPQQTLGALTNVTLRESVDAPPLNAP EEECCEEECCCCCCCHHHEEEEECCCEEEEEEEECCHHHHHHHHCCHHHHCCCCCCCCCC YWGSAVVPGGECRWIRFATWNTVRQDGCDPRQGSLTANLPDTTCVPNDYVASDGTLERAL CCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCEEECCCCCCCCCCCEECCCCHHHHHH GTQVQGEACTKTAAASESELASTDCEQGFACTDLLSENAQCLKTCDFMAPNPGCPSGTMC CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC GVYGLCTEQSVLEQNGFTFDPALTGEICSLEFAHYCGTEGARGVCADLNRDGKGECYPYH CEEECCCCHHHHHCCCCEECCCCCCCHHHEEHHHHCCCCCCCCEEECCCCCCCCCCCCHH RARSECGPGDELGYMNYALSGGGFDRGHGFCYHDGL HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA