| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758360
Identifier: 108758360
GI number: 108758360
Start: 5560529
End: 5561563
Strand: Direct
Name: 108758360
Synonym: MXAN_4491
Alternate gene names: NA
Gene position: 5560529-5561563 (Clockwise)
Preceding gene: 108760831
Following gene: 108763236
Centisome position: 60.84
GC content: 70.43
Gene sequence:
>1035_bases ATGACCGCCAGCGCGCGAGACATCCTCCAGGCCCTCCTCCAGAAAAAGGCTCGCGCGCGGGACCTTCAGCTTCACGGTGC GGACCTCACTGGCGCCCCACTCGACGGACTGCGTGGAGACGGCTTGGACCTGGGCACTGCCAGCCTGCGTGGCGCCAGCT TGCGCGGTTCGCGGTTCTCCGCATGCTCGTTCGAGCGCGCGGTTCTCGAGGAAGCCGTGCTGGAAAGTGCGACGCTCCGG CAGTGCCGGCTCGACGGCGCCGACCTGCGACGGGCGCGACTCTCCGAGGCCCGCATCGAGGACAGCTCCGCGCGCGGCAC AGACCTATCCCAAGCCGACCTGCGCAAGACCCGGCTCTCGGAGACATCGTTCTCACGGGCCATCCTCCGCGAAGCCGTGC TCGACGGCGCGGAAGGCGTCGGCGTGGAGCTACGAGGCGCGGACCTCACGGGCGCGTCACTCGTGGACGTGCGGCTGGAC GAGGCGGACTTTCGCGGCGCCGACCTGACGGGTGCCAACGTGTCAGGCGGGAGCTTCCGCCACGCGGACTTCCGAGGCGC CATCGTGGACGGCGTGCAGTGGACCGGGTGCGACCGCACCGGCGCCCGCTTCGATGCGGAGGACGCCACCCTGCCGCGCT CCCAGCCCAGCGATACGGGCATCCCGCCCAGCGCTCCCGAGAACTTCGATGCCCCAGCGATGGCCACCTGGCTCGGAAAC CTGATGGAGCACGCGCTGCGCTCCGCGCCAGGCAGCGTGCACGGCGCAGCCACACGAGGCCCGGAGACACCCGCCGAATT GTTACAGCTCCTCGGCTCGCTGCAGCAGGACCTCGGCGCCCGTGGCGTTGAACTCCCGGACCTGACCGCTCGCGTCCAAC CGCTGCTCTCCGCCCTGGAACAGCGTGGCGATGAACCGCCCGAGGAATGGAAGGCCTTGCTCGAAGCGCTCACCCCCACG GGAACCGAGGGGCGTGACGCGAGCGCCGAAGACATCGTCCGCGCGCTGCTCGCCAGGCTTCAGCCACCTCGATAG
Upstream 100 bases:
>100_bases CGCTCGACACCGCGGCACCTGGTGATGATGGCGCCGCGACGCTCATCGTTCGGCTCCACGAGCAGCTCCTCGCGCTCGGA CTCATGAGCCGGAGAGAGAC
Downstream 100 bases:
>100_bases CCATCTCCCACCGTCGCAACAGGTCTCAAGCTTTTCACCCACCGCGCGAGGTGACTTGACTCAAGGTGGATGTTTCGACA CCATACCCATACTCAAAGGC
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTASARDILQALLQKKARARDLQLHGADLTGAPLDGLRGDGLDLGTASLRGASLRGSRFSACSFERAVLEEAVLESATLR QCRLDGADLRRARLSEARIEDSSARGTDLSQADLRKTRLSETSFSRAILREAVLDGAEGVGVELRGADLTGASLVDVRLD EADFRGADLTGANVSGGSFRHADFRGAIVDGVQWTGCDRTGARFDAEDATLPRSQPSDTGIPPSAPENFDAPAMATWLGN LMEHALRSAPGSVHGAATRGPETPAELLQLLGSLQQDLGARGVELPDLTARVQPLLSALEQRGDEPPEEWKALLEALTPT GTEGRDASAEDIVRALLARLQPPR
Sequences:
>Translated_344_residues MTASARDILQALLQKKARARDLQLHGADLTGAPLDGLRGDGLDLGTASLRGASLRGSRFSACSFERAVLEEAVLESATLR QCRLDGADLRRARLSEARIEDSSARGTDLSQADLRKTRLSETSFSRAILREAVLDGAEGVGVELRGADLTGASLVDVRLD EADFRGADLTGANVSGGSFRHADFRGAIVDGVQWTGCDRTGARFDAEDATLPRSQPSDTGIPPSAPENFDAPAMATWLGN LMEHALRSAPGSVHGAATRGPETPAELLQLLGSLQQDLGARGVELPDLTARVQPLLSALEQRGDEPPEEWKALLEALTPT GTEGRDASAEDIVRALLARLQPPR >Mature_343_residues TASARDILQALLQKKARARDLQLHGADLTGAPLDGLRGDGLDLGTASLRGASLRGSRFSACSFERAVLEEAVLESATLRQ CRLDGADLRRARLSEARIEDSSARGTDLSQADLRKTRLSETSFSRAILREAVLDGAEGVGVELRGADLTGASLVDVRLDE ADFRGADLTGANVSGGSFRHADFRGAIVDGVQWTGCDRTGARFDAEDATLPRSQPSDTGIPPSAPENFDAPAMATWLGNL MEHALRSAPGSVHGAATRGPETPAELLQLLGSLQQDLGARGVELPDLTARVQPLLSALEQRGDEPPEEWKALLEALTPTG TEGRDASAEDIVRALLARLQPPR
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 pentapeptide repeat domains [H]
Homologues:
Organism=Drosophila melanogaster, GI221377802, Length=190, Percent_Identity=28.4210526315789, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 36470; Mature: 36339
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASARDILQALLQKKARARDLQLHGADLTGAPLDGLRGDGLDLGTASLRGASLRGSRFS CCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC ACSFERAVLEEAVLESATLRQCRLDGADLRRARLSEARIEDSSARGTDLSQADLRKTRLS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH ETSFSRAILREAVLDGAEGVGVELRGADLTGASLVDVRLDEADFRGADLTGANVSGGSFR HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEE HADFRGAIVDGVQWTGCDRTGARFDAEDATLPRSQPSDTGIPPSAPENFDAPAMATWLGN CCCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LMEHALRSAPGSVHGAATRGPETPAELLQLLGSLQQDLGARGVELPDLTARVQPLLSALE HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH QRGDEPPEEWKALLEALTPTGTEGRDASAEDIVRALLARLQPPR HHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TASARDILQALLQKKARARDLQLHGADLTGAPLDGLRGDGLDLGTASLRGASLRGSRFS CCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC ACSFERAVLEEAVLESATLRQCRLDGADLRRARLSEARIEDSSARGTDLSQADLRKTRLS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH ETSFSRAILREAVLDGAEGVGVELRGADLTGASLVDVRLDEADFRGADLTGANVSGGSFR HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEE HADFRGAIVDGVQWTGCDRTGARFDAEDATLPRSQPSDTGIPPSAPENFDAPAMATWLGN CCCCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LMEHALRSAPGSVHGAATRGPETPAELLQLLGSLQQDLGARGVELPDLTARVQPLLSALE HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH QRGDEPPEEWKALLEALTPTGTEGRDASAEDIVRALLARLQPPR HHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]