BacMap

Definition	Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession	NC_008095
Length	9,139,763

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The map label for this gene is 108758289

Identifier: 108758289

GI number: 108758289

Start: 5393908

End: 5394525

Strand: Direct

Name: 108758289

Synonym: MXAN_4390

Alternate gene names: NA

Gene position: 5393908-5394525 (Clockwise)

Preceding gene: 108762752

Following gene: 108760359

Centisome position: 59.02

GC content: 71.84

Gene sequence:

>618_bases
ATGATTCGCAAGCTGCTCTTGGGAACGCTGGGCCTGTTGATGCTGGGTGCCAGCGTGTTGACGGCCGCGTGGATGTCCCT
GCGCGCCACGCCCGCGCCGCAAGGGCGTCTGCTGGCCACGAGCGAGGCGGAGCGCTACCTGCTGGCCGCCGCCCGTGCCG
GAGAGACGGACATCGTCGCCGGGCTCGTCCAGGCGGGTACGCCGGTGGAGGCGCGGGATGCTCGCGGCTTCTCGCCGCTC
ATCCTCGCCGCGTACCACGGGCACGCGGACACGGTGCGCGCCCTGCTCTCCGCCGGCGCGGATGCGTGCGCGGGCGACAA
CAACGGCAACACCGCGCTCATGGGCGCGGCCTTCAAGGGCTATGCGGACATCGTCGGACTGATCAATCAGCAACCCTGCG
CGGTGGACCAGAGCAACCGCTTCGGCCAGACAGCGCTGATGTTCGCGTCCCTGTTCGGCCGCAAGGAGGTGGTGGAGCAA
CTCCGGCAGCAGGGGGCCTCCCCTGACGTGCGCGATGGCAGCGGCCGCAGCGCCCAGGACTGGGCACGCACGCAGGAGCC
GAACGCGCCCGTGCCCCAGGCGCCCACCGCGCCGGAGACGTCCGCCTCGGCGCGATGA

Upstream 100 bases:

>100_bases
CGGGATGTGGCGGCGCCCAGCGACTCCCCCCTCTCGCCGCCCGTCGCATCCCGGTCTTCCCTCAGCGGGGGCAGGCCCCC
TCTCTCTTCTGGAGTCCGCC

Downstream 100 bases:

>100_bases
CACGAAGGTGCTGCTCCGCCCAGGATGAGGCAAGGAGGCCCCATCCCGGTGAAGACGCCGCTGGGCATCGGGCCAGACGG
CTCGACGGCTAGACGTATCG

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIRKLLLGTLGLLMLGASVLTAAWMSLRATPAPQGRLLATSEAERYLLAAARAGETDIVAGLVQAGTPVEARDARGFSPL
ILAAYHGHADTVRALLSAGADACAGDNNGNTALMGAAFKGYADIVGLINQQPCAVDQSNRFGQTALMFASLFGRKEVVEQ
LRQQGASPDVRDGSGRSAQDWARTQEPNAPVPQAPTAPETSASAR

Sequences:

>Translated_205_residues
MIRKLLLGTLGLLMLGASVLTAAWMSLRATPAPQGRLLATSEAERYLLAAARAGETDIVAGLVQAGTPVEARDARGFSPL
ILAAYHGHADTVRALLSAGADACAGDNNGNTALMGAAFKGYADIVGLINQQPCAVDQSNRFGQTALMFASLFGRKEVVEQ
LRQQGASPDVRDGSGRSAQDWARTQEPNAPVPQAPTAPETSASAR
>Mature_205_residues
MIRKLLLGTLGLLMLGASVLTAAWMSLRATPAPQGRLLATSEAERYLLAAARAGETDIVAGLVQAGTPVEARDARGFSPL
ILAAYHGHADTVRALLSAGADACAGDNNGNTALMGAAFKGYADIVGLINQQPCAVDQSNRFGQTALMFASLFGRKEVVEQ
LRQQGASPDVRDGSGRSAQDWARTQEPNAPVPQAPTAPETSASAR

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI268607595, Length=129, Percent_Identity=39.5348837209302, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI62988328, Length=129, Percent_Identity=39.5348837209302, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI225543463, Length=136, Percent_Identity=37.5, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI225543461, Length=136, Percent_Identity=37.5, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI156142199, Length=135, Percent_Identity=34.0740740740741, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI156142197, Length=135, Percent_Identity=34.0740740740741, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI55741641, Length=129, Percent_Identity=37.984496124031, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI32967601, Length=133, Percent_Identity=35.3383458646617, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI157739945, Length=136, Percent_Identity=36.0294117647059, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI89363047, Length=129, Percent_Identity=34.1085271317829, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI87239981, Length=146, Percent_Identity=37.6712328767123, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI256574784, Length=143, Percent_Identity=40.5594405594406, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI24308163, Length=142, Percent_Identity=34.5070422535211, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4506217, Length=148, Percent_Identity=33.7837837837838, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI38683816, Length=128, Percent_Identity=35.9375, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI116063534, Length=129, Percent_Identity=35.6589147286822, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI38683807, Length=128, Percent_Identity=35.9375, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI55742857, Length=132, Percent_Identity=35.6060606060606, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI70995267, Length=127, Percent_Identity=37.007874015748, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI37620163, Length=138, Percent_Identity=37.6811594202899, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46519147, Length=138, Percent_Identity=37.6811594202899, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI34304379, Length=144, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI148596917, Length=133, Percent_Identity=36.0902255639098, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI34304381, Length=144, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI32483404, Length=136, Percent_Identity=36.7647058823529, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051599, Length=136, Percent_Identity=36.7647058823529, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051597, Length=136, Percent_Identity=36.7647058823529, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051593, Length=136, Percent_Identity=36.7647058823529, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI8051595, Length=136, Percent_Identity=36.7647058823529, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI224465233, Length=137, Percent_Identity=32.1167883211679, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI70780353, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI70780357, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI70780359, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI215598574, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI70780355, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI223634006, Length=141, Percent_Identity=34.7517730496454, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI13376842, Length=152, Percent_Identity=31.5789473684211, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646033, Length=132, Percent_Identity=38.6363636363636, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI212646035, Length=132, Percent_Identity=38.6363636363636, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI212646031, Length=132, Percent_Identity=38.6363636363636, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71981411, Length=139, Percent_Identity=35.2517985611511, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17542700, Length=121, Percent_Identity=35.5371900826446, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17555340, Length=148, Percent_Identity=34.4594594594595, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25145251, Length=121, Percent_Identity=35.5371900826446, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71981414, Length=139, Percent_Identity=35.2517985611511, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71981389, Length=139, Percent_Identity=35.2517985611511, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193206531, Length=122, Percent_Identity=37.7049180327869, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193206533, Length=122, Percent_Identity=37.7049180327869, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541900, Length=122, Percent_Identity=37.7049180327869, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541898, Length=122, Percent_Identity=37.7049180327869, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115533596, Length=168, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI221330478, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221330474, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221330476, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281363919, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45550479, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221330480, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45551135, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28573593, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221330482, Length=123, Percent_Identity=43.0894308943089, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24650843, Length=157, Percent_Identity=35.031847133758, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24583835, Length=138, Percent_Identity=34.7826086956522, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571867, Length=121, Percent_Identity=35.5371900826446, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571865, Length=121, Percent_Identity=35.5371900826446, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24663095, Length=147, Percent_Identity=35.3741496598639, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357681, Length=147, Percent_Identity=35.3741496598639, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24663102, Length=147, Percent_Identity=35.3741496598639, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24663106, Length=147, Percent_Identity=35.3741496598639, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24663091, Length=147, Percent_Identity=35.3741496598639, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 21313; Mature: 21313

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKLLLGTLGLLMLGASVLTAAWMSLRATPAPQGRLLATSEAERYLLAAARAGETDIVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCCHHHHH
GLVQAGTPVEARDARGFSPLILAAYHGHADTVRALLSAGADACAGDNNGNTALMGAAFKG
HHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHH
YADIVGLINQQPCAVDQSNRFGQTALMFASLFGRKEVVEQLRQQGASPDVRDGSGRSAQD
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHH
WARTQEPNAPVPQAPTAPETSASAR
HHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRKLLLGTLGLLMLGASVLTAAWMSLRATPAPQGRLLATSEAERYLLAAARAGETDIVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCCHHHHH
GLVQAGTPVEARDARGFSPLILAAYHGHADTVRALLSAGADACAGDNNGNTALMGAAFKG
HHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHH
YADIVGLINQQPCAVDQSNRFGQTALMFASLFGRKEVVEQLRQQGASPDVRDGSGRSAQD
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHH
WARTQEPNAPVPQAPTAPETSASAR
HHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]