| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pyk [H]
Identifier: 108758117
GI number: 108758117
Start: 4094025
End: 4095425
Strand: Reverse
Name: pyk [H]
Synonym: MXAN_3514
Alternate gene names: 108758117
Gene position: 4095425-4094025 (Counterclockwise)
Preceding gene: 108759250
Following gene: 108758433
Centisome position: 44.81
GC content: 69.24
Gene sequence:
>1401_bases ATGCGCAAGGCGAAAATCATCTGCACCCTGGGCCCCGCTTCGGACACGCCCGAGGTCATCGAAGGGCTCATCCGCGCGGG CATGAACATGGCGCGGTTGAACTTCTCGCACGGCACGCACGAGGAGCACCGCCGCCGAGTGGAAACCATCCGCAAGGTCG CGAAGCGCCTGGGCACGCCGGTGGCCATCCTCCAGGACATCCAGGGGCCGAAGATCCGCCTGGGCCGCTTCGACGGGGGG CAACTGCTGGTGAAGCAGGGCCAGTCCGTCACGGTGACGACGCGCAACGTCCTGGGCCAGGACGGCGTCATCCCCACCCC CATCAAGTCGCTGGTGAAGGACGTGGCCAAGGGCCACGAAATCCTCCTGGACGACGGGCGCGTGCGGCTGCGGGTGCTGC GCGTCCACGGGCAGGACGTGCAGTGCCGCGTGGAGGTGGGCGGCGTGCTCAAGAATCACAAGGGCCTCAACCTGCCCGGC TCGCCCATGTCGGTGCCCACGATTACGCGCAAGGACGCGGTGGACCTGGCCTTTGGGCAGGAGGTGGGCGTGGACTACGT GGCGCTGTCCTTCGTCCGCACGCCCGAGGACATCAAGAAGGCGCGCGCGCACGTGGCGAAGCTGAAGACGCCCCTCATCG CGAAGATTGAAAAGCCCCAGGCGGTGGAGCGCGTGGAAGAGATTGCCGCCGTGGCGGACGGCATCATGGTGGCGCGTGGC GACCTGGGCGTGGAGATGCCCCTGGAGCGCCTGCCGGCCATCCAGAAGCACATGGTGAGCGCGGTGAACCGCATGGGCGG GCTCGTCATCGTCGCCACGGAGATGCTGGAGAGCATGGTGGCCAATGCGCGCCCCACCCGCGCCGAGGTGTCCGACGTGG CCAACGCCATCCTCGACGGCGCGGACGCCGTCATGCTGTCGGGCGAGACGGCCGCGGGCAAGTACCCCGTCGAAGCGGCG TCCACCATGGCGTGCATCGTGGAGGAGACGGAGCGCGGCGTGGTGAAGCACCAGCACCACTCCCCCTTCGAGCGCTCCGA GGACCTGGGCACCGGCGTGGCCGCGGCGGCCGTGGCGGCGGCGACGCAACTGGGCATTGGCACCATCGTCGCCTACACGG AGAGCGGCCACACCGCGCGCCTCATCTCCGAGTTCCGGCCCCACGCGCGCATCATCGCCCTCACGCCGAGCGAGACGGCC GTGAATCGCATGGCGCTCTACTGGGGCGTGACGGGCATGCAGGTGGCGCGCGTGTCCACCACGGACGCCATGCTCACCCA GGTGCGTCAGCTGTGCCGGAAGGAGAAGCTCTGCGCGCCCGGCACGCCCGTCGTGGTGGTGGCCGGTGTCCCGCTCAACG TCCCGGGCAACACCAACCTGATGAGCATCCACCGCATCTGA
Upstream 100 bases:
>100_bases TCCGCGCGGCCCGAAGCCGGGCCCGCGTGGGTCGAAGAGTTAGTCTCGCGGGCGCAAGGCTGTCAAGCCGGGCACCCCGC CGCCTAGGATGCGCGGCAAT
Downstream 100 bases:
>100_bases GCGGGCCCGTGGAGGCCCCGGGACTTGCCGTCACCGGGGCTCCGTGGCCAGCGGGCTCAGAGGACCTTCTGCTCGAAGTC GTAGATCTTCTCGACGGCGA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MRKAKIICTLGPASDTPEVIEGLIRAGMNMARLNFSHGTHEEHRRRVETIRKVAKRLGTPVAILQDIQGPKIRLGRFDGG QLLVKQGQSVTVTTRNVLGQDGVIPTPIKSLVKDVAKGHEILLDDGRVRLRVLRVHGQDVQCRVEVGGVLKNHKGLNLPG SPMSVPTITRKDAVDLAFGQEVGVDYVALSFVRTPEDIKKARAHVAKLKTPLIAKIEKPQAVERVEEIAAVADGIMVARG DLGVEMPLERLPAIQKHMVSAVNRMGGLVIVATEMLESMVANARPTRAEVSDVANAILDGADAVMLSGETAAGKYPVEAA STMACIVEETERGVVKHQHHSPFERSEDLGTGVAAAAVAAATQLGIGTIVAYTESGHTARLISEFRPHARIIALTPSETA VNRMALYWGVTGMQVARVSTTDAMLTQVRQLCRKEKLCAPGTPVVVVAGVPLNVPGNTNLMSIHRI
Sequences:
>Translated_466_residues MRKAKIICTLGPASDTPEVIEGLIRAGMNMARLNFSHGTHEEHRRRVETIRKVAKRLGTPVAILQDIQGPKIRLGRFDGG QLLVKQGQSVTVTTRNVLGQDGVIPTPIKSLVKDVAKGHEILLDDGRVRLRVLRVHGQDVQCRVEVGGVLKNHKGLNLPG SPMSVPTITRKDAVDLAFGQEVGVDYVALSFVRTPEDIKKARAHVAKLKTPLIAKIEKPQAVERVEEIAAVADGIMVARG DLGVEMPLERLPAIQKHMVSAVNRMGGLVIVATEMLESMVANARPTRAEVSDVANAILDGADAVMLSGETAAGKYPVEAA STMACIVEETERGVVKHQHHSPFERSEDLGTGVAAAAVAAATQLGIGTIVAYTESGHTARLISEFRPHARIIALTPSETA VNRMALYWGVTGMQVARVSTTDAMLTQVRQLCRKEKLCAPGTPVVVVAGVPLNVPGNTNLMSIHRI >Mature_466_residues MRKAKIICTLGPASDTPEVIEGLIRAGMNMARLNFSHGTHEEHRRRVETIRKVAKRLGTPVAILQDIQGPKIRLGRFDGG QLLVKQGQSVTVTTRNVLGQDGVIPTPIKSLVKDVAKGHEILLDDGRVRLRVLRVHGQDVQCRVEVGGVLKNHKGLNLPG SPMSVPTITRKDAVDLAFGQEVGVDYVALSFVRTPEDIKKARAHVAKLKTPLIAKIEKPQAVERVEEIAAVADGIMVARG DLGVEMPLERLPAIQKHMVSAVNRMGGLVIVATEMLESMVANARPTRAEVSDVANAILDGADAVMLSGETAAGKYPVEAA STMACIVEETERGVVKHQHHSPFERSEDLGTGVAAAAVAAATQLGIGTIVAYTESGHTARLISEFRPHARIIALTPSETA VNRMALYWGVTGMQVARVSTTDAMLTQVRQLCRKEKLCAPGTPVVVVAGVPLNVPGNTNLMSIHRI
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=427, Percent_Identity=39.8126463700234, Blast_Score=298, Evalue=1e-80, Organism=Homo sapiens, GI33286422, Length=430, Percent_Identity=39.7674418604651, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI33286420, Length=430, Percent_Identity=39.7674418604651, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI32967597, Length=427, Percent_Identity=41.4519906323185, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI10835121, Length=427, Percent_Identity=41.4519906323185, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=38.3275261324042, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=38.3275261324042, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=35.4430379746835, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=35.4430379746835, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=34.1121495327103, Blast_Score=125, Evalue=8e-29, Organism=Escherichia coli, GI1787965, Length=471, Percent_Identity=40.7643312101911, Blast_Score=348, Evalue=4e-97, Organism=Escherichia coli, GI1788160, Length=475, Percent_Identity=40, Blast_Score=310, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17544584, Length=479, Percent_Identity=39.6659707724426, Blast_Score=301, Evalue=7e-82, Organism=Caenorhabditis elegans, GI71984406, Length=424, Percent_Identity=38.6792452830189, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17506831, Length=424, Percent_Identity=38.6792452830189, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17506829, Length=424, Percent_Identity=38.6792452830189, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71984413, Length=424, Percent_Identity=38.6792452830189, Blast_Score=269, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6319279, Length=428, Percent_Identity=37.3831775700935, Blast_Score=266, Evalue=6e-72, Organism=Saccharomyces cerevisiae, GI6324923, Length=426, Percent_Identity=38.0281690140845, Blast_Score=253, Evalue=4e-68, Organism=Drosophila melanogaster, GI28571814, Length=473, Percent_Identity=39.7463002114165, Blast_Score=295, Evalue=4e-80, Organism=Drosophila melanogaster, GI24648964, Length=487, Percent_Identity=39.4250513347023, Blast_Score=295, Evalue=4e-80, Organism=Drosophila melanogaster, GI24648966, Length=403, Percent_Identity=39.2059553349876, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI24581235, Length=469, Percent_Identity=31.7697228144989, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24646914, Length=272, Percent_Identity=37.8676470588235, Blast_Score=159, Evalue=5e-39,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 49990; Mature: 49990
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAKIICTLGPASDTPEVIEGLIRAGMNMARLNFSHGTHEEHRRRVETIRKVAKRLGTP CCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC VAILQDIQGPKIRLGRFDGGQLLVKQGQSVTVTTRNVLGQDGVIPTPIKSLVKDVAKGHE CHHHHCCCCCCEEEEECCCCCCEEECCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCE ILLDDGRVRLRVLRVHGQDVQCRVEVGGVLKNHKGLNLPGSPMSVPTITRKDAVDLAFGQ EEEECCCEEEEEEEECCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC EVGVDYVALSFVRTPEDIKKARAHVAKLKTPLIAKIEKPQAVERVEEIAAVADGIMVARG CCCCHHEEHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCEEEEEC DLGVEMPLERLPAIQKHMVSAVNRMGGLVIVATEMLESMVANARPTRAEVSDVANAILDG CCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCC ADAVMLSGETAAGKYPVEAASTMACIVEETERGVVKHQHHSPFERSEDLGTGVAAAAVAA CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCHHHHHHHHH ATQLGIGTIVAYTESGHTARLISEFRPHARIIALTPSETAVNRMALYWGVTGMQVARVST HHHCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHEECCCCCEEEEECH TDAMLTQVRQLCRKEKLCAPGTPVVVVAGVPLNVPGNTNLMSIHRI HHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCEEEEECC >Mature Secondary Structure MRKAKIICTLGPASDTPEVIEGLIRAGMNMARLNFSHGTHEEHRRRVETIRKVAKRLGTP CCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC VAILQDIQGPKIRLGRFDGGQLLVKQGQSVTVTTRNVLGQDGVIPTPIKSLVKDVAKGHE CHHHHCCCCCCEEEEECCCCCCEEECCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHCCCE ILLDDGRVRLRVLRVHGQDVQCRVEVGGVLKNHKGLNLPGSPMSVPTITRKDAVDLAFGQ EEEECCCEEEEEEEECCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC EVGVDYVALSFVRTPEDIKKARAHVAKLKTPLIAKIEKPQAVERVEEIAAVADGIMVARG CCCCHHEEHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCEEEEEC DLGVEMPLERLPAIQKHMVSAVNRMGGLVIVATEMLESMVANARPTRAEVSDVANAILDG CCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCC ADAVMLSGETAAGKYPVEAASTMACIVEETERGVVKHQHHSPFERSEDLGTGVAAAAVAA CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCHHHHHHHHH ATQLGIGTIVAYTESGHTARLISEFRPHARIIALTPSETAVNRMALYWGVTGMQVARVST HHHCCCEEEEEEECCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHEECCCCCEEEEECH TDAMLTQVRQLCRKEKLCAPGTPVVVVAGVPLNVPGNTNLMSIHRI HHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842; 7559358 [H]