| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yqiK [H]
Identifier: 108757982
GI number: 108757982
Start: 4160152
End: 4162320
Strand: Direct
Name: yqiK [H]
Synonym: MXAN_3571
Alternate gene names: 108757982
Gene position: 4160152-4162320 (Clockwise)
Preceding gene: 108757921
Following gene: 108763997
Centisome position: 45.52
GC content: 67.04
Gene sequence:
>2169_bases ATGGCCATGGACCCCATTACCGCGGTCGCTGCCGGCATCGGTGGCATCATCCTTCTCGGAGGCATCCTCCTCACCATCGT CCGGCTCTACCGGCAGGTGGACCAGGGCAAGGTGCTCATCGTCAACACGCTGAAGAACGAGCCGGTCGTCACCTTCACCG GCGCGGTGGTGTTCCCCATCATCAACCGGGCCGAGGTGATGGACATCTCCTTGAAGACGGTGGAAATCGACCGCCGTGGC AAGGAAGGCCTCATCTGCCGGGACAACATCCGGGGTGACATCAAGGTCACCTTCTTCGTCCGCGTGAACAAGACGCGCGA GGACGTGCTGAAGGTGGCGCAGACCATTGGCTGCGCGCGTGCCTCCGACCAGGAGACGCTGGAGAACCTCTTCGAGGCCA AGTTCTCGGAGGCCCTCAAGACGGTGGGCAAGAGCTTCGACTTCGAGGAGCTCTACACCAAGCGCGAGGAGATCAAGGAC CAGGTCGTCAACGTCATCGGCCGTGACCTCAGCGGGTACATGCTGGAGGACTGCGCCATCGACTTCCTGGAGCAGACCCC GGTCGAGATGCTGGACAAGGACAACATCCTCGACGCGCAGGGCATCCGGAAGATCACCGAGCTGACGACGAAGCAGAATG TCTTCACCAACGAGCTGCGCCAGGACGAGCGCATGGCCGTCACCAAGCGCAACGTCGAGGCGGATGAGGCCATCTTCGCC CTCGAGCGTCAGCGTGAAGAGGCCGCCGCGAAGCAGAAGCGCGAGATCGACAGCATCCAGGCCCGCGAGACGGCCGAGGC CGAGCGCGTGAAGCAGGAGGAGTACGCCAAGGCCCAGCTGGCGCGCATCAAGGCCGAGGAAGAAATCAACATCAACGAGC AGAACAAGGCCCGGCAGATCGAGGTCGCGCAGAAGAACCGCGAGCGCGTGGTGGGCGTGGAGACCGAGCGCGTGGAGAAG GACCGCGCCCTGGAAGCCATCAACCGCGAGCGTGAGACGGAGCTGCAGCGCATCGCCAAGGAGAAGGCGCTCGAAGGCGA GAAGAAGCTCATCGCCGACGTGGTGCGGGCCCGCATCGCCGTGGAGAAGACGGTGGCGGAGGAGGAGGAGCGCATCAAGG ACCTGCGCGTGAAGGCCGAGGCCACCCGCCGCAAGGACGCGCTGCTCATCACCGCCGAGGCGCAGGCGCAGGAGAAGCTG GTCAAGGACATCAAGGCGGCCGAGGCCTCCAACGAGGTGGCCAAGTTCACCGCCAAGGAGAAGCTGACGCTGGCCGAGGC CGAGCTGGAGGCCGCTGACAAGACGGCGAAGGCGAAGGTCCGTCTGGCCGAGGGCGTCCAGGCCGAGGCCGCCGCCGAGG GCCTGGCCGAGGTCCGCGTGAAGGAGGCCGACGCGCAGGCGCAGGAGAAGCTCGGCATGGTCAACGTCCGCGTGAAGGAA GCCGAGGCGGGCGCCATCGAGAAGCAGGGCCACGCGGAGGCGAACATCGTCCGCGAGAAGCTGCTGGCGGAGGCCGCGGG TGCGCAGGAGAAGGGCCTGGCTCAGGCGCGCGTGCTGGAGGCGGAAGCCAGCGCCATCCAGAAGCGCGGCGAGGCGGAGG CCATTGCCACGCGCGAGAAGCAGCTGGCCGAGGCCGCTGCCATCCAGGAGAAGCTGCTGGCCGAGGCCCGCGGTCTGGCG GAGAAGGCCGCGTCCATGAAGCTGATGGACGGCGTCGGCCGCGAGCACGAGGAGTTCCGCCTCAAGCTCAACAAGGAGCG CGACGTGGAGCTGGAGGCCATCCGCGCGAAGAAGGACATCGCGCACGCGCAGGCCGAGGTGCTGGCCAAGGCGTTCGCCA ACGCGAAGTTCAACATCGTCGGTGGCGACGGCCAGTTCTTCGAGCGCTTCGTCAAGGCGGTGTCGTTCGGCACGGCGGTG GACGGCGCGCTGGACCACGGCGAGGCGCTGAAGACGGCGCTGGGCGGCTACCTCAACGGCGAGAAGGACCTGCCGGCCGA CCTGAAGGAGATTCTCTCCAAGCCGGGTCTGAGCAACGACGCGCAGAACCTGGCCGTGGCCGCGCTGCTGCACAAGATGG CGGCCAGCCCCGTGGCCGCGACCTCGGCCGGCCTCAAGGCGCTGGTGGAAGACGTGGCGCGGCCGGGCACGGTCGACAAG CAGGGCTGA
Upstream 100 bases:
>100_bases GGTCGCGCCGAGGGGGCGACCGTCACATTCGACGCCGGAGGGCTTTTGCGGGGGATCTCCGGCGCCTGATACAAGGCCCG CTGTCATCATCAATCAGGAA
Downstream 100 bases:
>100_bases CAGTCCCAATGGGCCACCGCCGTGAACAGGCGGCGGTGGCACGGCCGTAAGACGACCCTCACTCCGGCCTCCCCTCCGGG GTGGCGCCCCTCCGCTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MAMDPITAVAAGIGGIILLGGILLTIVRLYRQVDQGKVLIVNTLKNEPVVTFTGAVVFPIINRAEVMDISLKTVEIDRRG KEGLICRDNIRGDIKVTFFVRVNKTREDVLKVAQTIGCARASDQETLENLFEAKFSEALKTVGKSFDFEELYTKREEIKD QVVNVIGRDLSGYMLEDCAIDFLEQTPVEMLDKDNILDAQGIRKITELTTKQNVFTNELRQDERMAVTKRNVEADEAIFA LERQREEAAAKQKREIDSIQARETAEAERVKQEEYAKAQLARIKAEEEININEQNKARQIEVAQKNRERVVGVETERVEK DRALEAINRERETELQRIAKEKALEGEKKLIADVVRARIAVEKTVAEEEERIKDLRVKAEATRRKDALLITAEAQAQEKL VKDIKAAEASNEVAKFTAKEKLTLAEAELEAADKTAKAKVRLAEGVQAEAAAEGLAEVRVKEADAQAQEKLGMVNVRVKE AEAGAIEKQGHAEANIVREKLLAEAAGAQEKGLAQARVLEAEASAIQKRGEAEAIATREKQLAEAAAIQEKLLAEARGLA EKAASMKLMDGVGREHEEFRLKLNKERDVELEAIRAKKDIAHAQAEVLAKAFANAKFNIVGGDGQFFERFVKAVSFGTAV DGALDHGEALKTALGGYLNGEKDLPADLKEILSKPGLSNDAQNLAVAALLHKMAASPVAATSAGLKALVEDVARPGTVDK QG
Sequences:
>Translated_722_residues MAMDPITAVAAGIGGIILLGGILLTIVRLYRQVDQGKVLIVNTLKNEPVVTFTGAVVFPIINRAEVMDISLKTVEIDRRG KEGLICRDNIRGDIKVTFFVRVNKTREDVLKVAQTIGCARASDQETLENLFEAKFSEALKTVGKSFDFEELYTKREEIKD QVVNVIGRDLSGYMLEDCAIDFLEQTPVEMLDKDNILDAQGIRKITELTTKQNVFTNELRQDERMAVTKRNVEADEAIFA LERQREEAAAKQKREIDSIQARETAEAERVKQEEYAKAQLARIKAEEEININEQNKARQIEVAQKNRERVVGVETERVEK DRALEAINRERETELQRIAKEKALEGEKKLIADVVRARIAVEKTVAEEEERIKDLRVKAEATRRKDALLITAEAQAQEKL VKDIKAAEASNEVAKFTAKEKLTLAEAELEAADKTAKAKVRLAEGVQAEAAAEGLAEVRVKEADAQAQEKLGMVNVRVKE AEAGAIEKQGHAEANIVREKLLAEAAGAQEKGLAQARVLEAEASAIQKRGEAEAIATREKQLAEAAAIQEKLLAEARGLA EKAASMKLMDGVGREHEEFRLKLNKERDVELEAIRAKKDIAHAQAEVLAKAFANAKFNIVGGDGQFFERFVKAVSFGTAV DGALDHGEALKTALGGYLNGEKDLPADLKEILSKPGLSNDAQNLAVAALLHKMAASPVAATSAGLKALVEDVARPGTVDK QG >Mature_721_residues AMDPITAVAAGIGGIILLGGILLTIVRLYRQVDQGKVLIVNTLKNEPVVTFTGAVVFPIINRAEVMDISLKTVEIDRRGK EGLICRDNIRGDIKVTFFVRVNKTREDVLKVAQTIGCARASDQETLENLFEAKFSEALKTVGKSFDFEELYTKREEIKDQ VVNVIGRDLSGYMLEDCAIDFLEQTPVEMLDKDNILDAQGIRKITELTTKQNVFTNELRQDERMAVTKRNVEADEAIFAL ERQREEAAAKQKREIDSIQARETAEAERVKQEEYAKAQLARIKAEEEININEQNKARQIEVAQKNRERVVGVETERVEKD RALEAINRERETELQRIAKEKALEGEKKLIADVVRARIAVEKTVAEEEERIKDLRVKAEATRRKDALLITAEAQAQEKLV KDIKAAEASNEVAKFTAKEKLTLAEAELEAADKTAKAKVRLAEGVQAEAAAEGLAEVRVKEADAQAQEKLGMVNVRVKEA EAGAIEKQGHAEANIVREKLLAEAAGAQEKGLAQARVLEAEASAIQKRGEAEAIATREKQLAEAAAIQEKLLAEARGLAE KAASMKLMDGVGREHEEFRLKLNKERDVELEAIRAKKDIAHAQAEVLAKAFANAKFNIVGGDGQFFERFVKAVSFGTAVD GALDHGEALKTALGGYLNGEKDLPADLKEILSKPGLSNDAQNLAVAALLHKMAASPVAATSAGLKALVEDVARPGTVDKQ G
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Escherichia coli, GI1789430, Length=449, Percent_Identity=29.6213808463252, Blast_Score=122, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 79285; Mature: 79154
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDPITAVAAGIGGIILLGGILLTIVRLYRQVDQGKVLIVNTLKNEPVVTFTGAVVFPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHH INRAEVMDISLKTVEIDRRGKEGLICRDNIRGDIKVTFFVRVNKTREDVLKVAQTIGCAR HCCCCEEEEEEEEEEECCCCCCCCEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCC ASDQETLENLFEAKFSEALKTVGKSFDFEELYTKREEIKDQVVNVIGRDLSGYMLEDCAI CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DFLEQTPVEMLDKDNILDAQGIRKITELTTKQNVFTNELRQDERMAVTKRNVEADEAIFA HHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LERQREEAAAKQKREIDSIQARETAEAERVKQEEYAKAQLARIKAEEEININEQNKARQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH EVAQKNRERVVGVETERVEKDRALEAINRERETELQRIAKEKALEGEKKLIADVVRARIA HHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VEKTVAEEEERIKDLRVKAEATRRKDALLITAEAQAQEKLVKDIKAAEASNEVAKFTAKE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHH KLTLAEAELEAADKTAKAKVRLAEGVQAEAAAEGLAEVRVKEADAQAQEKLGMVNVRVKE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC AEAGAIEKQGHAEANIVREKLLAEAAGAQEKGLAQARVLEAEASAIQKRGEAEAIATREK CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHH QLAEAAAIQEKLLAEARGLAEKAASMKLMDGVGREHEEFRLKLNKERDVELEAIRAKKDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHH AHAQAEVLAKAFANAKFNIVGGDGQFFERFVKAVSFGTAVDGALDHGEALKTALGGYLNG HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHCCCCCC EKDLPADLKEILSKPGLSNDAQNLAVAALLHKMAASPVAATSAGLKALVEDVARPGTVDK CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC QG CC >Mature Secondary Structure AMDPITAVAAGIGGIILLGGILLTIVRLYRQVDQGKVLIVNTLKNEPVVTFTGAVVFPI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCHHHHHH INRAEVMDISLKTVEIDRRGKEGLICRDNIRGDIKVTFFVRVNKTREDVLKVAQTIGCAR HCCCCEEEEEEEEEEECCCCCCCCEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCC ASDQETLENLFEAKFSEALKTVGKSFDFEELYTKREEIKDQVVNVIGRDLSGYMLEDCAI CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DFLEQTPVEMLDKDNILDAQGIRKITELTTKQNVFTNELRQDERMAVTKRNVEADEAIFA HHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LERQREEAAAKQKREIDSIQARETAEAERVKQEEYAKAQLARIKAEEEININEQNKARQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH EVAQKNRERVVGVETERVEKDRALEAINRERETELQRIAKEKALEGEKKLIADVVRARIA HHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VEKTVAEEEERIKDLRVKAEATRRKDALLITAEAQAQEKLVKDIKAAEASNEVAKFTAKE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHH KLTLAEAELEAADKTAKAKVRLAEGVQAEAAAEGLAEVRVKEADAQAQEKLGMVNVRVKE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC AEAGAIEKQGHAEANIVREKLLAEAAGAQEKGLAQARVLEAEASAIQKRGEAEAIATREK CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHH QLAEAAAIQEKLLAEARGLAEKAASMKLMDGVGREHEEFRLKLNKERDVELEAIRAKKDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHH AHAQAEVLAKAFANAKFNIVGGDGQFFERFVKAVSFGTAVDGALDHGEALKTALGGYLNG HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHCCCCCC EKDLPADLKEILSKPGLSNDAQNLAVAALLHKMAASPVAATSAGLKALVEDVARPGTVDK CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC QG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]