| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yvnB [H]
Identifier: 108757947
GI number: 108757947
Start: 4172389
End: 4173846
Strand: Reverse
Name: yvnB [H]
Synonym: MXAN_3577
Alternate gene names: 108757947
Gene position: 4173846-4172389 (Counterclockwise)
Preceding gene: 108763427
Following gene: 108757181
Centisome position: 45.67
GC content: 66.05
Gene sequence:
>1458_bases TTGAGACACCTGAGAACCTCGGTCCCCGTGGCACTGCTGGGCCTCCTGGCGGCGTGCGGCGGCCCGGTGGAATCGCAGCC CGAAGTCGAGATCGCCACCACCGAGTCCGCGCTGAACTGCGACTCGATGAGCCGGGCCGTCCATCACCGCATCAAGCCGG CCAACGAAGACAGCCTCTACACGCTCAACGCGAACGAGGCCGCCAACGCCGCCACCACCTGGGGCTACACGGAAGACCGG GGCGTGGCCTTTCTCGCCGCGGCCTCCACGGGGACGGGGCTGTCCCCCGTCTACCGCATCTACAGCCCTAGCCGGCAGGA GCACTTCTGGACCATCGATGAGGCCGAGCGGAACGACCTCATGCAGAACGGGGGCTACACGACGGACGAGAACGTCGGCT TCTACGCGTCGAAGACGGCCGCCTCATGCCTCGTTCCGGTGTACCGCTTCTCCAACACCACGCTGCGCAAGCACCGCTTC GCCATCACCGAGGCCCAGCGCGACGCGCTCGCCTCCACCGGCTGGGTCAACCAGGGCATCAAATTCTACGCCGCCCCGGA GTCCGCGCCGCCGGTCGACACGAAGTTCACCTTCGCCGTCATCCCCGACACACAGAACGAGGTCCTCACCACGCCACCCA CGCGACTCACGCACCGGCTCCAGTGGCTGGTGGACAACCGGAGCTCGCTCGACCTGCGCTTCGTGCTGCACACGGGCGAC GTCGTGAACTGGGACACGCCGGACCACATCCAGTACGTGCGCGCCAGCGAGGCCACGGAGATTCTGGACGCCGCCGGCCT GCCCTACGTCTACGCCATTGGCAACCATGACACCGCGGCCGTGTGCCCCGGCGGCAGCGCCTGCCCGGGCAACGTCAACG CCAACTTGCGCGACACCACCACCTTCAACGCGCACTTCCCGCTCACGCGCTTCACCGCGCTGGGGGGCGTCTACGAGCCG GGGAAGATCGACAACTCCTACCACACGTTCTCCGCTGGCGACCTGGACTGGCTCGTGCTCAACCTGGAGCTGTGGGCCCG CACGGGCGCCGTGGACTGGGCGAAGACGGTGCTGGCGCAACATCCGCGTCACAACGTCATCATCAACACCCACTCCCACC TGAATGGCAGCGGCGCCATCGAGCAGAGCAACGGCGGCTATGGCAACAACAGCCCGCAATACGTGTTCGACCAGCTCATC AAGCAGTACGCCAACGTGCGGTTCGTCTTCTCCGGGCACACGGGCAATGCCGCGTACCGGACCAGCACGGGGGTCCACGG CAACACCATCCACCAAATCCTGACGTCGTACCACGAGAACACATCGAACCTGACGCGGTTGGTGGAGGTGGACACGGCGG CCAACACCTTCTCCACGCGGGTGTACTCGCCGATGACGAACGCGGAGAAACAGGACGGCTCTAAATTCGCCATCAGTAAC GTGAGCTGGGTCCGCTGA
Upstream 100 bases:
>100_bases GGTGGGTCTTCCTGGACCACGGCTCGGGTGCTATTGATTTTCTCGCAATACTCGTTTTGCGGCCATCCCTGTCCGCGACA CCCCCTGCGAGGAGACACCT
Downstream 100 bases:
>100_bases TGCTCTAGGGTAGGCGGGCCGTGACGTCCACGCCCGCCTCCCCTGCCCTCGTCTCCCGTGATCGCATCCGAGCCATCGAC TGGCTCCGGGGCATCGCGGT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MRHLRTSVPVALLGLLAACGGPVESQPEVEIATTESALNCDSMSRAVHHRIKPANEDSLYTLNANEAANAATTWGYTEDR GVAFLAAASTGTGLSPVYRIYSPSRQEHFWTIDEAERNDLMQNGGYTTDENVGFYASKTAASCLVPVYRFSNTTLRKHRF AITEAQRDALASTGWVNQGIKFYAAPESAPPVDTKFTFAVIPDTQNEVLTTPPTRLTHRLQWLVDNRSSLDLRFVLHTGD VVNWDTPDHIQYVRASEATEILDAAGLPYVYAIGNHDTAAVCPGGSACPGNVNANLRDTTTFNAHFPLTRFTALGGVYEP GKIDNSYHTFSAGDLDWLVLNLELWARTGAVDWAKTVLAQHPRHNVIINTHSHLNGSGAIEQSNGGYGNNSPQYVFDQLI KQYANVRFVFSGHTGNAAYRTSTGVHGNTIHQILTSYHENTSNLTRLVEVDTAANTFSTRVYSPMTNAEKQDGSKFAISN VSWVR
Sequences:
>Translated_485_residues MRHLRTSVPVALLGLLAACGGPVESQPEVEIATTESALNCDSMSRAVHHRIKPANEDSLYTLNANEAANAATTWGYTEDR GVAFLAAASTGTGLSPVYRIYSPSRQEHFWTIDEAERNDLMQNGGYTTDENVGFYASKTAASCLVPVYRFSNTTLRKHRF AITEAQRDALASTGWVNQGIKFYAAPESAPPVDTKFTFAVIPDTQNEVLTTPPTRLTHRLQWLVDNRSSLDLRFVLHTGD VVNWDTPDHIQYVRASEATEILDAAGLPYVYAIGNHDTAAVCPGGSACPGNVNANLRDTTTFNAHFPLTRFTALGGVYEP GKIDNSYHTFSAGDLDWLVLNLELWARTGAVDWAKTVLAQHPRHNVIINTHSHLNGSGAIEQSNGGYGNNSPQYVFDQLI KQYANVRFVFSGHTGNAAYRTSTGVHGNTIHQILTSYHENTSNLTRLVEVDTAANTFSTRVYSPMTNAEKQDGSKFAISN VSWVR >Mature_485_residues MRHLRTSVPVALLGLLAACGGPVESQPEVEIATTESALNCDSMSRAVHHRIKPANEDSLYTLNANEAANAATTWGYTEDR GVAFLAAASTGTGLSPVYRIYSPSRQEHFWTIDEAERNDLMQNGGYTTDENVGFYASKTAASCLVPVYRFSNTTLRKHRF AITEAQRDALASTGWVNQGIKFYAAPESAPPVDTKFTFAVIPDTQNEVLTTPPTRLTHRLQWLVDNRSSLDLRFVLHTGD VVNWDTPDHIQYVRASEATEILDAAGLPYVYAIGNHDTAAVCPGGSACPGNVNANLRDTTTFNAHFPLTRFTALGGVYEP GKIDNSYHTFSAGDLDWLVLNLELWARTGAVDWAKTVLAQHPRHNVIINTHSHLNGSGAIEQSNGGYGNNSPQYVFDQLI KQYANVRFVFSGHTGNAAYRTSTGVHGNTIHQILTSYHENTSNLTRLVEVDTAANTFSTRVYSPMTNAEKQDGSKFAISN VSWVR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011401 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 53158; Mature: 53158
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLRTSVPVALLGLLAACGGPVESQPEVEIATTESALNCDSMSRAVHHRIKPANEDSLY CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE TLNANEAANAATTWGYTEDRGVAFLAAASTGTGLSPVYRIYSPSRQEHFWTIDEAERNDL EECCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHEECCCCCCCEEEECCCHHHHHH MQNGGYTTDENVGFYASKTAASCLVPVYRFSNTTLRKHRFAITEAQRDALASTGWVNQGI HHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHEEEHHHHHHHHHHHCCCHHCCC KFYAAPESAPPVDTKFTFAVIPDTQNEVLTTPPTRLTHRLQWLVDNRSSLDLRFVLHTGD EEEECCCCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHEECCCCCCEEEEEEECCC VVNWDTPDHIQYVRASEATEILDAAGLPYVYAIGNHDTAAVCPGGSACPGNVNANLRDTT EECCCCCHHHHEEHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCE TFNAHFPLTRFTALGGVYEPGKIDNSYHTFSAGDLDWLVLNLELWARTGAVDWAKTVLAQ EEECCCCHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHC HPRHNVIINTHSHLNGSGAIEQSNGGYGNNSPQYVFDQLIKQYANVRFVFSGHTGNAAYR CCCCCEEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEE TSTGVHGNTIHQILTSYHENTSNLTRLVEVDTAANTFSTRVYSPMTNAEKQDGSKFAISN ECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEECC VSWVR CEECC >Mature Secondary Structure MRHLRTSVPVALLGLLAACGGPVESQPEVEIATTESALNCDSMSRAVHHRIKPANEDSLY CCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE TLNANEAANAATTWGYTEDRGVAFLAAASTGTGLSPVYRIYSPSRQEHFWTIDEAERNDL EECCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHEECCCCCCCEEEECCCHHHHHH MQNGGYTTDENVGFYASKTAASCLVPVYRFSNTTLRKHRFAITEAQRDALASTGWVNQGI HHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHEEEHHHHHHHHHHHCCCHHCCC KFYAAPESAPPVDTKFTFAVIPDTQNEVLTTPPTRLTHRLQWLVDNRSSLDLRFVLHTGD EEEECCCCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHHHHEECCCCCCEEEEEEECCC VVNWDTPDHIQYVRASEATEILDAAGLPYVYAIGNHDTAAVCPGGSACPGNVNANLRDTT EECCCCCHHHHEEHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCE TFNAHFPLTRFTALGGVYEPGKIDNSYHTFSAGDLDWLVLNLELWARTGAVDWAKTVLAQ EEECCCCHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHC HPRHNVIINTHSHLNGSGAIEQSNGGYGNNSPQYVFDQLIKQYANVRFVFSGHTGNAAYR CCCCCEEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEE TSTGVHGNTIHQILTSYHENTSNLTRLVEVDTAANTFSTRVYSPMTNAEKQDGSKFAISN ECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEECC VSWVR CEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]