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The map label for this gene is fliR [H]

Identifier: 108757930

GI number: 108757930

Start: 7013737

End: 7014531

Strand: Reverse

Name: fliR [H]

Synonym: MXAN_5645

Alternate gene names: 108757930

Gene position: 7014531-7013737 (Counterclockwise)

Preceding gene: 108761227

Following gene: 108764098

Centisome position: 76.75

GC content: 69.31

Gene sequence:

>795_bases
ATGAATCTGGAGCCGCTCCGCGCCTGGCTCGAGTCACTGGGGCCGGACATCATCGTGGTGGCGCTGTGTGCCGCGCGGCT
GCTGCCTATGACGTTCCTGTGTCCGCTACTGGGAGGTCAGGCCACGCCGACGATGGTCCGCCTGGCATTGGTGCTGTCCC
TGTCGCTCTTCCTCCGGGTGGAGGCAGGCGTGGTGCTGGATGCGCCTGTCACGTCCGCGGTGGCCCTGGGCGGATTGGTG
ATTCGCGAGCTGCTCTTCGGGACATCCGTGGGGTTGGTCGCGGCACTTCCCTTCGATGCCGCGCGCATGGGGGGCCGCTT
CATCGACCTGCTTCGTGGAACCTCCGCCGAGGCGAGTCTGCCCCTGGCGGGGAGCCGTGAGTCCGCGGCAGGGGAGGGGC
TCTACCATCTGCTGGTGGCGCTGGTGGTCTCCGGTGGCATGTGGCCGCTCGTCATCTCCAGCGTGCTGCGTGGGTTCGGC
GTGGTGAAGCTCGGCGCCTTCGTTCCAACCGAGGCGGCCACGCTGCATGTCGTCCTGCTGGCGGGCGCGGCCATGGCCAC
GGGGCTGGCGGTGGGGGCGCCGATCGCCGCGGCGGTGCTGACCGTGGACTGTTTCCTGGGTCTGGCCTCGCGAGCGGCAC
CTCAGGTGAATCTTCAGGAGGTGGGGACGCCGCTGAAGATTCTGGGAGGGGGCGCCCTGTTGTGGCTGGGGACGGGCGTG
TTGTGTGAGCGGCTGCTGGCGGGTGTGTTGTCCGTGGAAGGCGCGCTGGCGCTGTTGGGTGAGGTGGCGCGGTGA

Upstream 100 bases:

>100_bases
GCGCGGCCGTCCTGGCACTGGTCCTCGCCGGACCCTGGATTGCCGGGCAGCTCACGCGTTTCACCCACCAGCTCCTGATG
CTCATCTCCGAGGTCGCGGC

Downstream 100 bases:

>100_bases
GTGGGGAGAAGACAGAGAAGCCCAGCGCGAAGCGCCTTCGTGAAGCACGGCGCAAAGGACAGATTCCCCGCAGCCGCTTG
CTGAACGCCAGCGCGGTGAC

Product: FliR/MopE/SpaR family exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNLEPLRAWLESLGPDIIVVALCAARLLPMTFLCPLLGGQATPTMVRLALVLSLSLFLRVEAGVVLDAPVTSAVALGGLV
IRELLFGTSVGLVAALPFDAARMGGRFIDLLRGTSAEASLPLAGSRESAAGEGLYHLLVALVVSGGMWPLVISSVLRGFG
VVKLGAFVPTEAATLHVVLLAGAAMATGLAVGAPIAAAVLTVDCFLGLASRAAPQVNLQEVGTPLKILGGGALLWLGTGV
LCERLLAGVLSVEGALALLGEVAR

Sequences:

>Translated_264_residues
MNLEPLRAWLESLGPDIIVVALCAARLLPMTFLCPLLGGQATPTMVRLALVLSLSLFLRVEAGVVLDAPVTSAVALGGLV
IRELLFGTSVGLVAALPFDAARMGGRFIDLLRGTSAEASLPLAGSRESAAGEGLYHLLVALVVSGGMWPLVISSVLRGFG
VVKLGAFVPTEAATLHVVLLAGAAMATGLAVGAPIAAAVLTVDCFLGLASRAAPQVNLQEVGTPLKILGGGALLWLGTGV
LCERLLAGVLSVEGALALLGEVAR
>Mature_264_residues
MNLEPLRAWLESLGPDIIVVALCAARLLPMTFLCPLLGGQATPTMVRLALVLSLSLFLRVEAGVVLDAPVTSAVALGGLV
IRELLFGTSVGLVAALPFDAARMGGRFIDLLRGTSAEASLPLAGSRESAAGEGLYHLLVALVVSGGMWPLVISSVLRGFG
VVKLGAFVPTEAATLHVVLLAGAAMATGLAVGAPIAAAVLTVDCFLGLASRAAPQVNLQEVGTPLKILGGGALLWLGTGV
LCERLLAGVLSVEGALALLGEVAR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26755; Mature: 26755

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEPLRAWLESLGPDIIVVALCAARLLPMTFLCPLLGGQATPTMVRLALVLSLSLFLRV
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EAGVVLDAPVTSAVALGGLVIRELLFGTSVGLVAALPFDAARMGGRFIDLLRGTSAEASL
HCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCHHHHHHCCCCCCCCC
PLAGSRESAAGEGLYHLLVALVVSGGMWPLVISSVLRGFGVVKLGAFVPTEAATLHVVLL
CCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH
AGAAMATGLAVGAPIAAAVLTVDCFLGLASRAAPQVNLQEVGTPLKILGGGALLWLGTGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCHHHHHHHHH
LCERLLAGVLSVEGALALLGEVAR
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLEPLRAWLESLGPDIIVVALCAARLLPMTFLCPLLGGQATPTMVRLALVLSLSLFLRV
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
EAGVVLDAPVTSAVALGGLVIRELLFGTSVGLVAALPFDAARMGGRFIDLLRGTSAEASL
HCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCHHHHHHCCCCCCCCC
PLAGSRESAAGEGLYHLLVALVVSGGMWPLVISSVLRGFGVVKLGAFVPTEAATLHVVLL
CCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH
AGAAMATGLAVGAPIAAAVLTVDCFLGLASRAAPQVNLQEVGTPLKILGGGALLWLGTGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCHHHHHHHHH
LCERLLAGVLSVEGALALLGEVAR
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]