| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is cocE [H]
Identifier: 108757751
GI number: 108757751
Start: 4577070
End: 4579007
Strand: Reverse
Name: cocE [H]
Synonym: MXAN_3810
Alternate gene names: 108757751
Gene position: 4579007-4577070 (Counterclockwise)
Preceding gene: 108763029
Following gene: 108756990
Centisome position: 50.1
GC content: 66.98
Gene sequence:
>1938_bases ATGCATCCCGTGACCCGATGCCTCGCGGCTGTCCTGCTGGCCACCGTCGCAGGCCCGGCGCAGGCGCAGTCCACCCCGCC AGCCCCGAAGCGCCCTTACAGCATCTCTCCCGAGCGCACCGAACGCGTCCGCTCGCAGTACACCAAGTTCGAGTACCGCA TTCCCATGCGGGACGGGACGCGCCTGTTCACCTCCGTCTACGTCCCCGCGGACGCGTCACCGGGGAAGCGCTATCCCATC ATCCTGGTGCGCACGCCGTACAGCGTCGCACCCTATGGCGTGGACCGGTATCCCCCCGCGCTGGCCCCCACCGAGGCGTT CGAGAAGGACGGCTTCATCTTTGCCTTCCAGGACGTGCGCGGCCGAAACATGTCCGAAGGCGAGTTCGTCAACGTACGCC CCTACAAGCCGAAGAAGGCCGGGCCCAAGGACTTTGACGAGAGCACCGACACGTACGACACCATCGAGTGGCTGGTGAAG CGCGTGGCGAACAACAACGGCCGCGTGGGCCAGTGGGGGATTTCGTACCCCGGCTTCTACGCGTCGGCGGGCGCCATTGA TTCGCACCCGGCGCTCAAGGCGGTGTCACCGCAGGCCCCCATCGCCGACTGGTTCTGGGATGACATGCACCGCCACGGCG CCTTCAACCTGGCGCTGGCGTTCAACTTCTTCTCCACGTTCGGCAAGCCCCGGCCCCACCCCACGGACAACGAGGAGTGG CAGCGCTTCGAGCACGGCACGCCGGACGGCTACCAGTTCTTCCTGGACCTGGGCCCCCTGGGCAACGCGGACGCGAAGCA CATGAAGGGGGACGTCGCCTTCTGGAAGGACGTCACCGCGCATCCCAACTACGACAGCTTCTGGCAGGCGCGGAACCTGC TCCCGCACCTGAAGAACATCAAGGCGGCGGTGCTCACGGTGGGCGGCTGGTACGACACCGAGGACCTCTACGGCCCCCTG CGGACCTACGCCGCCATCGAGAAGCAGAACCCCGGCATCTCCAACAGCCTCATCATGGGCCCGTGGCCGCACGGCGGCTG GCAGCGCGGCGGTGGCGAGTCCCTGGGCGACGCGGACTTCGGCTTCGCCACCAGCGAGACCTACCAGACGTTGGCGCTGG ACTTCTTCAAGCACCACCTCAAGGGCGGCGCGAAGCCGGACGTGCCGGAGGCCATGGTGTTCGAGACGGGCGCCAACCGC TGGCGCCGCTTCGACACGTGGCCGCCCAAGGGGCTGCGCGAGACGCGGCTGTACTTCCAGCCCAAGGGTGGCTTGGCCAC GACGGCGCCGAAGACGACGGGCGCATCCTTCGCCGAGTACGTGAGCGACCCCGCCAAGCCCGTGCCGTACACGCAGGAGA TGATGACGGGCTGGAGCAAGGACTACATGACGGAGGACCAGCGCTTCGCCGCGCGCCGGCCGGACGTGCTGGTGTTCGAG ACGGAGCCACTGGAGCGCGACCTCACGCTGGCGGGACCGCTGGAGGCGGAGTTGTGGGTTTCCACGACGGGCACCGACGC GGACTGGGTGGTGAAGCTGGTGGACGTCAACCCGGGCAAGGTGCGCGGGTGGCGCAAGGGCGATGAAGAGAAGGGGCAGA AGAACCGGGGCCATCAGCAGACGCTGGTGCGTGGCGAGCCCTTCCGCGGCCGGTTCCGCGACAGCTATAGCGAGCCCAAG CCCTTCAAGCCCAACGAGGTGACGAAGGTGCGCTTCGTCATCAATGACGTGTTCCACACCTTCCAGCGTGGGCACCGCGT GATGATTCAGGTCCAGTCGAGCTGGTTCCCGTTCATCGACCGCAATCCGCAGACCTACGTGCCCAACATCTTCGAGGCGA AGGAGGAGCACTTCACGCGCGCCTTCCATCGCGTCTACCACTCCGCGGCGAACCCTAGTTTCATCCAGGTGGGCGTGCTG CCCTCGTTGGACGAGTAG
Upstream 100 bases:
>100_bases CTGGACGACGGCGGGGAAGAGCGGAGCTGATTCCGGGAACAAGCGGGCCGCTCGCGGTGTTGCGGGCCGGCCTTCCAGCG TCATCGTTCCAGGAGCGTGC
Downstream 100 bases:
>100_bases CGCGAGGGCCCCCACGCGGAGCCCTCCGTTCGCCGCCATCAGGGCTGCTTCTGTGCAGCGGCGAAGGGAAGGGTGTTCTC GTGGGGGTGCCAGCCTTGCG
Product: CocE/NonD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MHPVTRCLAAVLLATVAGPAQAQSTPPAPKRPYSISPERTERVRSQYTKFEYRIPMRDGTRLFTSVYVPADASPGKRYPI ILVRTPYSVAPYGVDRYPPALAPTEAFEKDGFIFAFQDVRGRNMSEGEFVNVRPYKPKKAGPKDFDESTDTYDTIEWLVK RVANNNGRVGQWGISYPGFYASAGAIDSHPALKAVSPQAPIADWFWDDMHRHGAFNLALAFNFFSTFGKPRPHPTDNEEW QRFEHGTPDGYQFFLDLGPLGNADAKHMKGDVAFWKDVTAHPNYDSFWQARNLLPHLKNIKAAVLTVGGWYDTEDLYGPL RTYAAIEKQNPGISNSLIMGPWPHGGWQRGGGESLGDADFGFATSETYQTLALDFFKHHLKGGAKPDVPEAMVFETGANR WRRFDTWPPKGLRETRLYFQPKGGLATTAPKTTGASFAEYVSDPAKPVPYTQEMMTGWSKDYMTEDQRFAARRPDVLVFE TEPLERDLTLAGPLEAELWVSTTGTDADWVVKLVDVNPGKVRGWRKGDEEKGQKNRGHQQTLVRGEPFRGRFRDSYSEPK PFKPNEVTKVRFVINDVFHTFQRGHRVMIQVQSSWFPFIDRNPQTYVPNIFEAKEEHFTRAFHRVYHSAANPSFIQVGVL PSLDE
Sequences:
>Translated_645_residues MHPVTRCLAAVLLATVAGPAQAQSTPPAPKRPYSISPERTERVRSQYTKFEYRIPMRDGTRLFTSVYVPADASPGKRYPI ILVRTPYSVAPYGVDRYPPALAPTEAFEKDGFIFAFQDVRGRNMSEGEFVNVRPYKPKKAGPKDFDESTDTYDTIEWLVK RVANNNGRVGQWGISYPGFYASAGAIDSHPALKAVSPQAPIADWFWDDMHRHGAFNLALAFNFFSTFGKPRPHPTDNEEW QRFEHGTPDGYQFFLDLGPLGNADAKHMKGDVAFWKDVTAHPNYDSFWQARNLLPHLKNIKAAVLTVGGWYDTEDLYGPL RTYAAIEKQNPGISNSLIMGPWPHGGWQRGGGESLGDADFGFATSETYQTLALDFFKHHLKGGAKPDVPEAMVFETGANR WRRFDTWPPKGLRETRLYFQPKGGLATTAPKTTGASFAEYVSDPAKPVPYTQEMMTGWSKDYMTEDQRFAARRPDVLVFE TEPLERDLTLAGPLEAELWVSTTGTDADWVVKLVDVNPGKVRGWRKGDEEKGQKNRGHQQTLVRGEPFRGRFRDSYSEPK PFKPNEVTKVRFVINDVFHTFQRGHRVMIQVQSSWFPFIDRNPQTYVPNIFEAKEEHFTRAFHRVYHSAANPSFIQVGVL PSLDE >Mature_645_residues MHPVTRCLAAVLLATVAGPAQAQSTPPAPKRPYSISPERTERVRSQYTKFEYRIPMRDGTRLFTSVYVPADASPGKRYPI ILVRTPYSVAPYGVDRYPPALAPTEAFEKDGFIFAFQDVRGRNMSEGEFVNVRPYKPKKAGPKDFDESTDTYDTIEWLVK RVANNNGRVGQWGISYPGFYASAGAIDSHPALKAVSPQAPIADWFWDDMHRHGAFNLALAFNFFSTFGKPRPHPTDNEEW QRFEHGTPDGYQFFLDLGPLGNADAKHMKGDVAFWKDVTAHPNYDSFWQARNLLPHLKNIKAAVLTVGGWYDTEDLYGPL RTYAAIEKQNPGISNSLIMGPWPHGGWQRGGGESLGDADFGFATSETYQTLALDFFKHHLKGGAKPDVPEAMVFETGANR WRRFDTWPPKGLRETRLYFQPKGGLATTAPKTTGASFAEYVSDPAKPVPYTQEMMTGWSKDYMTEDQRFAARRPDVLVFE TEPLERDLTLAGPLEAELWVSTTGTDADWVVKLVDVNPGKVRGWRKGDEEKGQKNRGHQQTLVRGEPFRGRFRDSYSEPK PFKPNEVTKVRFVINDVFHTFQRGHRVMIQVQSSWFPFIDRNPQTYVPNIFEAKEEHFTRAFHRVYHSAANPSFIQVGVL PSLDE
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 73002; Mature: 73002
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVTRCLAAVLLATVAGPAQAQSTPPAPKRPYSISPERTERVRSQYTKFEYRIPMRDGT CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCC RLFTSVYVPADASPGKRYPIILVRTPYSVAPYGVDRYPPALAPTEAFEKDGFIFAFQDVR EEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCC GRNMSEGEFVNVRPYKPKKAGPKDFDESTDTYDTIEWLVKRVANNNGRVGQWGISYPGFY CCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC ASAGAIDSHPALKAVSPQAPIADWFWDDMHRHGAFNLALAFNFFSTFGKPRPHPTDNEEW CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCCCHHH QRFEHGTPDGYQFFLDLGPLGNADAKHMKGDVAFWKDVTAHPNYDSFWQARNLLPHLKNI HHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC KAAVLTVGGWYDTEDLYGPLRTYAAIEKQNPGISNSLIMGPWPHGGWQRGGGESLGDADF EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC GFATSETYQTLALDFFKHHLKGGAKPDVPEAMVFETGANRWRRFDTWPPKGLRETRLYFQ CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHEECCCCCCCCCCCCEEEEC PKGGLATTAPKTTGASFAEYVSDPAKPVPYTQEMMTGWSKDYMTEDQRFAARRPDVLVFE CCCCCEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCHHHCCCHHHHHHCCCCEEEEE TEPLERDLTLAGPLEAELWVSTTGTDADWVVKLVDVNPGKVRGWRKGDEEKGQKNRGHQQ CCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCHH TLVRGEPFRGRFRDSYSEPKPFKPNEVTKVRFVINDVFHTFQRGHRVMIQVQSSWFPFID HHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC RNPQTYVPNIFEAKEEHFTRAFHRVYHSAANPSFIQVGVLPSLDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MHPVTRCLAAVLLATVAGPAQAQSTPPAPKRPYSISPERTERVRSQYTKFEYRIPMRDGT CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCC RLFTSVYVPADASPGKRYPIILVRTPYSVAPYGVDRYPPALAPTEAFEKDGFIFAFQDVR EEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCC GRNMSEGEFVNVRPYKPKKAGPKDFDESTDTYDTIEWLVKRVANNNGRVGQWGISYPGFY CCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC ASAGAIDSHPALKAVSPQAPIADWFWDDMHRHGAFNLALAFNFFSTFGKPRPHPTDNEEW CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCCCHHH QRFEHGTPDGYQFFLDLGPLGNADAKHMKGDVAFWKDVTAHPNYDSFWQARNLLPHLKNI HHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC KAAVLTVGGWYDTEDLYGPLRTYAAIEKQNPGISNSLIMGPWPHGGWQRGGGESLGDADF EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC GFATSETYQTLALDFFKHHLKGGAKPDVPEAMVFETGANRWRRFDTWPPKGLRETRLYFQ CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHEECCCCCCCCCCCCEEEEC PKGGLATTAPKTTGASFAEYVSDPAKPVPYTQEMMTGWSKDYMTEDQRFAARRPDVLVFE CCCCCEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCHHHCCCHHHHHHCCCCEEEEE TEPLERDLTLAGPLEAELWVSTTGTDADWVVKLVDVNPGKVRGWRKGDEEKGQKNRGHQQ CCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCHH TLVRGEPFRGRFRDSYSEPKPFKPNEVTKVRFVINDVFHTFQRGHRVMIQVQSSWFPFID HHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC RNPQTYVPNIFEAKEEHFTRAFHRVYHSAANPSFIQVGVLPSLDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]