| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yceB [H]
Identifier: 108757637
GI number: 108757637
Start: 4264151
End: 4265182
Strand: Reverse
Name: yceB [H]
Synonym: MXAN_3632
Alternate gene names: 108757637
Gene position: 4265182-4264151 (Counterclockwise)
Preceding gene: 108761302
Following gene: 108758663
Centisome position: 46.67
GC content: 68.02
Gene sequence:
>1032_bases GTGAAGCTCAGTGTTCTCGATCACTCCATCGTCGCCAGCGACTCCCAGACACGTGCGGCCTTCCAAAACACGGTGGAGCT GGCTCGAGCCGCCGAGCAGCTCGGTTATCACCGCTTCTGGCTCGCGGAGCATCACGGCTCAGGACACTTCGCGGGCGTGG CGCCGGAAATCCTCGTCGCGCATGTCGCGGCGGCGACGTCTCGCATCCGGGTGGGAACGGGCGGCGTCCTGCTGTCGAAC TACAGCCCCTTCAAGGTCGCCGAGGTCTTCCGGCTGCTGGAGACGCTCCACCCCAACCGCATCGACCTGGGCATCGGACG GACATCGGGCAGCACGGACCTGGTGGCCCGCGCACTGGCCTACGGGCCGCCGATGAACAACGAGAACTTCCCCACGAAGC TGGAGGACCTCGTCGCCTTCCTGTCGGGCACCACGCCCGCGACGCCGGAGTTCGAGAAGCTGAGCCTGAAGACCATGGCG CCGGGCATGCCGCAGGTCTGGGCCCTGGGCTCGGGCGAGCAGAGCGCCGCGCTCGCGGCCCGGCTGGGTCTGTCCTTCTG CTTCGCGCACTTCTTCAACCCCATCCACGGTGGACCGGTGACGCGGGGGTATCGCGAGCGCTTCCAGCCCTCGCACGTGC AGGCGGCTCCCAACTCCGCCGTCAGCGTCTACGTCATCTGTGCCCCGACCGAGCAGGAGGCCCGGCGAATAGCCCGGAGC AGCGACCTGCTGACCATCAACACTCGCAGGGGCCGGCCCGAAGCGCCCATTCCGTCCATCGAGGAGGCGGAGGCCTACGC CTACACGCCCGAGGACCTGGCCACGCTCGAGTTCGACCGCAAACGCGTCGTGTGTGGTTCACCGGACCAGGTGAAGGAAC AGCTGTTGCGCATGGCCGCCGAATTCCAGGCGGACGAGCTGCTCGTCACCACCATCGTCCACGACCATCGCGCCCGGATG CGCTCCTACGAGCTGCTCGCTGACGCGTTCTCTCTCTCGAGCACGCCGCCCGCCGCCCAGGCAGCCAGCTGA
Upstream 100 bases:
>100_bases ATATAGGCTTTGTCACCATCTTGAAACGCGGACACGCGACGACTCGGCCCGTCTCGAAGCGGCCCCGAGGGCGCCGTCTG CCCGGGAAGGAACGCTCGCC
Downstream 100 bases:
>100_bases GCCTCGCCTCCGCGCAACGCGGAGCCCTGCCCCGCGTCACGGTCACCGCCCTGAGCCCCGCGGCATGAGGGCTCCGTGGG GAGTGTGCGTGGTGCCACCG
Product: luciferase-like monooxygenase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKLSVLDHSIVASDSQTRAAFQNTVELARAAEQLGYHRFWLAEHHGSGHFAGVAPEILVAHVAAATSRIRVGTGGVLLSN YSPFKVAEVFRLLETLHPNRIDLGIGRTSGSTDLVARALAYGPPMNNENFPTKLEDLVAFLSGTTPATPEFEKLSLKTMA PGMPQVWALGSGEQSAALAARLGLSFCFAHFFNPIHGGPVTRGYRERFQPSHVQAAPNSAVSVYVICAPTEQEARRIARS SDLLTINTRRGRPEAPIPSIEEAEAYAYTPEDLATLEFDRKRVVCGSPDQVKEQLLRMAAEFQADELLVTTIVHDHRARM RSYELLADAFSLSSTPPAAQAAS
Sequences:
>Translated_343_residues MKLSVLDHSIVASDSQTRAAFQNTVELARAAEQLGYHRFWLAEHHGSGHFAGVAPEILVAHVAAATSRIRVGTGGVLLSN YSPFKVAEVFRLLETLHPNRIDLGIGRTSGSTDLVARALAYGPPMNNENFPTKLEDLVAFLSGTTPATPEFEKLSLKTMA PGMPQVWALGSGEQSAALAARLGLSFCFAHFFNPIHGGPVTRGYRERFQPSHVQAAPNSAVSVYVICAPTEQEARRIARS SDLLTINTRRGRPEAPIPSIEEAEAYAYTPEDLATLEFDRKRVVCGSPDQVKEQLLRMAAEFQADELLVTTIVHDHRARM RSYELLADAFSLSSTPPAAQAAS >Mature_343_residues MKLSVLDHSIVASDSQTRAAFQNTVELARAAEQLGYHRFWLAEHHGSGHFAGVAPEILVAHVAAATSRIRVGTGGVLLSN YSPFKVAEVFRLLETLHPNRIDLGIGRTSGSTDLVARALAYGPPMNNENFPTKLEDLVAFLSGTTPATPEFEKLSLKTMA PGMPQVWALGSGEQSAALAARLGLSFCFAHFFNPIHGGPVTRGYRERFQPSHVQAAPNSAVSVYVICAPTEQEARRIARS SDLLTINTRRGRPEAPIPSIEEAEAYAYTPEDLATLEFDRKRVVCGSPDQVKEQLLRMAAEFQADELLVTTIVHDHRARM RSYELLADAFSLSSTPPAAQAAS
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=331, Percent_Identity=34.441087613293, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37275; Mature: 37275
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSVLDHSIVASDSQTRAAFQNTVELARAAEQLGYHRFWLAEHHGSGHFAGVAPEILVA CEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHH HVAAATSRIRVGTGGVLLSNYSPFKVAEVFRLLETLHPNRIDLGIGRTSGSTDLVARALA HHHHHHHEEEECCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH YGPPMNNENFPTKLEDLVAFLSGTTPATPEFEKLSLKTMAPGMPQVWALGSGEQSAALAA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEEHHHHCCCCCCEEEECCCCHHHHHHH RLGLSFCFAHFFNPIHGGPVTRGYRERFQPSHVQAAPNSAVSVYVICAPTEQEARRIARS HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHC SDLLTINTRRGRPEAPIPSIEEAEAYAYTPEDLATLEFDRKRVVCGSPDQVKEQLLRMAA CCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHEEECCCEEECCCHHHHHHHHHHHHH EFQADELLVTTIVHDHRARMRSYELLADAFSLSSTPPAAQAAS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKLSVLDHSIVASDSQTRAAFQNTVELARAAEQLGYHRFWLAEHHGSGHFAGVAPEILVA CEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHH HVAAATSRIRVGTGGVLLSNYSPFKVAEVFRLLETLHPNRIDLGIGRTSGSTDLVARALA HHHHHHHEEEECCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH YGPPMNNENFPTKLEDLVAFLSGTTPATPEFEKLSLKTMAPGMPQVWALGSGEQSAALAA CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEEHHHHCCCCCCEEEECCCCHHHHHHH RLGLSFCFAHFFNPIHGGPVTRGYRERFQPSHVQAAPNSAVSVYVICAPTEQEARRIARS HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHC SDLLTINTRRGRPEAPIPSIEEAEAYAYTPEDLATLEFDRKRVVCGSPDQVKEQLLRMAA CCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHEEECCCEEECCCHHHHHHHHHHHHH EFQADELLVTTIVHDHRARMRSYELLADAFSLSSTPPAAQAAS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]