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The map label for this gene is 108757389

Identifier: 108757389

GI number: 108757389

Start: 5657350

End: 5657949

Strand: Direct

Name: 108757389

Synonym: MXAN_4535

Alternate gene names: NA

Gene position: 5657350-5657949 (Clockwise)

Preceding gene: 108760660

Following gene: 108763715

Centisome position: 61.9

GC content: 61.83

Gene sequence:

>600_bases
ATGGGAATTCCAACACGAGACGAGGACGTCGCGTTGCATGCGCGCATCCTCCAGCGAGAGTCGGTGGCGAACGTGGACGC
ATTTGCGGTCTTCGTCGACCCCATCATCGCAGCCGTGAAGTACGCCCGAGGATGCACCCACGAAATGGCCCGTGACGCCG
CCATCGACGTGTTGCTCGACTACCTCGAAGCCCCCGAGCGCTTTGATCCGCAGCGAGGTCGCCTGTTCTCCTACCTGGCG
CAATCCGCGAAGAACACCGTCACGGACTGGCAGCGCTCGGCGACGAGGCGGCAGGCGCGTGAAGAAAAATTCGGCCTCCT
TTTCGAACTTCTGGGGAGGTCTCCGAAAGACTGTTTGGAGCAATCCGCGGAGGTGAAGTGCATCGTGGAACGCATCGAAC
AATCCGACCTCTCCCAGGTGGACCGCGCGTTCCTCGGACTCATGCTCCAGGGAGAACGGTCGACCCAGCGGTTCGCCGAG
GTACTCGGCCTGGGTGCGCTCCCCGCAGTCGACATCCAGCGCGAAGTGAAGCGCAACCGTGACCGCATCATGAAGTGGCT
GGTGCGCTTTGGAAGGGAGGTTTTCGGTGACGAATCCTGA

Upstream 100 bases:

>100_bases
GCAGATGCATGTTTCCGTCGAACTCACCAGTGCGGCTCCGAAGGAGCACATGCGCGCACGTATCGAGCGCGTCCACGGAA
ACTTCCGATGAGGAGTCAGG

Downstream 100 bases:

>100_bases
TTGGCTTGAGACTGCGGCCAGGCGGAGCACGGAGAAAGCCTGGATGCTTGGCCATGCGTTCGAGCGTTACCGCGCGATTG
AAGGCATCACCACCACTGAC

Product: putative RNA polymerase sigma-70 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MGIPTRDEDVALHARILQRESVANVDAFAVFVDPIIAAVKYARGCTHEMARDAAIDVLLDYLEAPERFDPQRGRLFSYLA
QSAKNTVTDWQRSATRRQAREEKFGLLFELLGRSPKDCLEQSAEVKCIVERIEQSDLSQVDRAFLGLMLQGERSTQRFAE
VLGLGALPAVDIQREVKRNRDRIMKWLVRFGREVFGDES

Sequences:

>Translated_199_residues
MGIPTRDEDVALHARILQRESVANVDAFAVFVDPIIAAVKYARGCTHEMARDAAIDVLLDYLEAPERFDPQRGRLFSYLA
QSAKNTVTDWQRSATRRQAREEKFGLLFELLGRSPKDCLEQSAEVKCIVERIEQSDLSQVDRAFLGLMLQGERSTQRFAE
VLGLGALPAVDIQREVKRNRDRIMKWLVRFGREVFGDES
>Mature_198_residues
GIPTRDEDVALHARILQRESVANVDAFAVFVDPIIAAVKYARGCTHEMARDAAIDVLLDYLEAPERFDPQRGRLFSYLAQ
SAKNTVTDWQRSATRRQAREEKFGLLFELLGRSPKDCLEQSAEVKCIVERIEQSDLSQVDRAFLGLMLQGERSTQRFAEV
LGLGALPAVDIQREVKRNRDRIMKWLVRFGREVFGDES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22671; Mature: 22540

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIPTRDEDVALHARILQRESVANVDAFAVFVDPIIAAVKYARGCTHEMARDAAIDVLLD
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLEAPERFDPQRGRLFSYLAQSAKNTVTDWQRSATRRQAREEKFGLLFELLGRSPKDCLE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QSAEVKCIVERIEQSDLSQVDRAFLGLMLQGERSTQRFAEVLGLGALPAVDIQREVKRNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DRIMKWLVRFGREVFGDES
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GIPTRDEDVALHARILQRESVANVDAFAVFVDPIIAAVKYARGCTHEMARDAAIDVLLD
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLEAPERFDPQRGRLFSYLAQSAKNTVTDWQRSATRRQAREEKFGLLFELLGRSPKDCLE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QSAEVKCIVERIEQSDLSQVDRAFLGLMLQGERSTQRFAEVLGLGALPAVDIQREVKRNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DRIMKWLVRFGREVFGDES
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA