Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108757160

Identifier: 108757160

GI number: 108757160

Start: 6148378

End: 6150096

Strand: Direct

Name: 108757160

Synonym: MXAN_4914

Alternate gene names: NA

Gene position: 6148378-6150096 (Clockwise)

Preceding gene: 108762692

Following gene: 108763653

Centisome position: 67.27

GC content: 66.38

Gene sequence:

>1719_bases
TTGAATCCACACCACAGGACCTCATCCCGGGGGGGATGGATGCACCTGCGCGAGCCTGCCCGTGTGCTCGCGCTGACTGC
CCTTGCGCTCGCGACGCCCGCGCTAGCCGCCGAGGGATTCACCTCCGTCACCGCCAGTGGGGATGACGGCAACGTCCCCT
CCAACGCCATCGACGGCGACCCCACCACGCGCTGGTCCAGCGACGGCGTGGGAGAATGGCTCACCGGCGACCTGGGCGCG
GTGAAGTCACTCAGCGCCGTGGACATCTCCTGGCACCGTGGCAACGAGCGCGTCAATCGCTTCGTCATCTCCATCTCCAC
GGACGGCACGAACTTCACGCAGGTGCACTCCGGCAGCTCGTCCGGCAACACCGCCGCGCCGGAGCGTTACTCGTTCTCCC
CGGTGAACGCACGCTACGTGCGCATCACCGTGAACGGCAGCACGATGAACACCTGGGCCAGCATCGCGGAGCTGGCGGCC
GTCACCGACGGCTCGAACCCGCCCGGCGCTCCCCCCGAGCGTTTCACCTCCGTCGCCGCCAGCGGAGATGACGGCAACGT
CCCCGCCAACGCCATCGACGGCGACCCCGCCACGCGGTGGTCCAGCGACGGCGTGGGGCAATGGATTACCGGCGACCTGG
GCACCGTGGCGCAGTTGGGCGCCATGGACATCGGCTGGCACCGTGGCAACGAGCGCGTCAACAACTTCGTCATCTCCACC
TCCACGGACGGCACGACCTTCACGCAGGTGCATTCCGGCAGGTCATCCGGCAACACCGCCGCGCTGGAGCGCTACTCGTT
CTCCCCAGTGAGCGCGCGCTACGTGCGCATCACCGTGAACGGCAGCACGATGAACACCTGGGCCAGCATCGCGGAAATGC
AGCCCGGCACCGGCTCGACCCCGCCCACCAATCCGCCCACCGACCCGCCTGGCGAGCAGGGCCAGGACAAGTTCGGCGTG
ACGATGATCTATCCGACCAGGTCGGGCGGCGAGCAGTGGTTCCTGGCGGACAACGCTACGTCCGACAAGCGCTTCGACCC
GCAGAACACCATCAGCCGCAACTCGGACGGCTCATGGAAGATGAGGAACACCAAGGTGCGCATGTCCGTGTTCACCTCCA
CGGGCTACAGCGCGTCCAAGATTCCGACCTACGACCGCGACGTGCTGGCCAGCCGGGGCTACATGCAGGCGGCGAACGAC
TGGCGGAACATCGAGATGACTGGCTTCGTGAAGGTCAACTCGGTGTCCGACGTGTCGGACAACTTCGCGTGGTACGCGCG
AGGCGGCAAGCACAACGACAACCACTCGGGGTGCGAGGGCAGCAGCTACAAGGGTTCGCTGCACTATGACGGCCGCGTGC
GCTGGCAGAAGGAGACGTGGCACGTCTCCTACAACCAGGCGTCGTACAAGTCCGGTACCTCGGCGCTGCGCGGCCGCTGG
GTGGGCTTCAAGTCGGTGATGCGCAACACCAAGGTCAACGGAAAGGAGGCCGTGCGCCTGGAGATGTACCTCAACGAGAA
CGCCGACAAGAAGACCTGGAAGAAGGTCTACGACATGGTGGACTCGGGCAGTTGGGGTGGTGACGCCAGCCACTGCGGCG
GCGCGGTGAACGCAATGCCCATCACTTGGGGCGGCCCCATCGCGGTGTTCCGCTGGGACAGCGCCAACGACGTGGACTTC
AAGTGGCTGTCCGTGCGCGAAATCTCGCCGGAGCAGTGA

Upstream 100 bases:

>100_bases
GTCTGAAAGCCAACGCGCCGCTGGGGGACCGCGGCGCGCCGGTCCGGCATCGTCCGCCCGGTGAGTCGTGGCTCCTGGTG
GTCTCACTTGAGGTATCAAC

Downstream 100 bases:

>100_bases
GCCGCTGACCACGTGACGCCCGCCCCGGTGCTCCTTCCTTGGAGTGCCGGGGCGTGGCGTTTTCAGGGCATTCGATGAGC
GCCATCACCGGGGTCCGAGC

Product: F5/8 type C domain-containing protein

Products: NA

Alternate protein names: F5/8 Type C Domain-Containing Protein; Secreted Protein; Lipoprotein; Coagulation Factor 5/8 Type; Alginate Lyase; Cellulase; Alpha-L-Fucosidase; Poly(Beta-D-Mannuronate) Lyase; ATPase; Glycoside Hydrolase Family; Metallophosphoesterase; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; Glycoside Hydrolase

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGDPTTRWSSDGVGEWLTGDLGA
VKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSSSGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAA
VTDGSNPPGAPPERFTSVAASGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST
STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGSTPPTNPPTDPPGEQGQDKFGV
TMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWKMRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAAND
WRNIEMTGFVKVNSVSDVSDNFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW
VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMPITWGGPIAVFRWDSANDVDF
KWLSVREISPEQ

Sequences:

>Translated_572_residues
MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGDPTTRWSSDGVGEWLTGDLGA
VKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSSSGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAA
VTDGSNPPGAPPERFTSVAASGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST
STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGSTPPTNPPTDPPGEQGQDKFGV
TMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWKMRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAAND
WRNIEMTGFVKVNSVSDVSDNFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW
VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMPITWGGPIAVFRWDSANDVDF
KWLSVREISPEQ
>Mature_572_residues
MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGDPTTRWSSDGVGEWLTGDLGA
VKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSSSGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAA
VTDGSNPPGAPPERFTSVAASGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST
STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGSTPPTNPPTDPPGEQGQDKFGV
TMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWKMRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAAND
WRNIEMTGFVKVNSVSDVSDNFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW
VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMPITWGGPIAVFRWDSANDVDF
KWLSVREISPEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61956; Mature: 61956

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGD
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCCC
PTTRWSSDGVGEWLTGDLGAVKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSS
CCCCCCCCCCCCHHCCCHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCC
SGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAAVTDGSNPPGAPPERFTSVAA
CCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEC
SGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCEEECEECCCCCCCEEEEEE
STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGST
CCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCC
PPTNPPTDPPGEQGQDKFGVTMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWK
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCEE
MRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAANDWRNIEMTGFVKVNSVSDVSD
EECEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEECCCCCCCC
NFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW
CEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCHHHHEEC
VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMP
CCHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEE
ITWGGPIAVFRWDSANDVDFKWLSVREISPEQ
EECCCCEEEEEECCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGD
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCCC
PTTRWSSDGVGEWLTGDLGAVKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSS
CCCCCCCCCCCCHHCCCHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCC
SGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAAVTDGSNPPGAPPERFTSVAA
CCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEC
SGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCEEECEECCCCCCCEEEEEE
STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGST
CCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCC
PPTNPPTDPPGEQGQDKFGVTMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWK
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCEE
MRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAANDWRNIEMTGFVKVNSVSDVSD
EECEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEECCCCCCCC
NFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW
CEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCHHHHEEC
VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMP
CCHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEE
ITWGGPIAVFRWDSANDVDFKWLSVREISPEQ
EECCCCEEEEEECCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA