| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757160
Identifier: 108757160
GI number: 108757160
Start: 6148378
End: 6150096
Strand: Direct
Name: 108757160
Synonym: MXAN_4914
Alternate gene names: NA
Gene position: 6148378-6150096 (Clockwise)
Preceding gene: 108762692
Following gene: 108763653
Centisome position: 67.27
GC content: 66.38
Gene sequence:
>1719_bases TTGAATCCACACCACAGGACCTCATCCCGGGGGGGATGGATGCACCTGCGCGAGCCTGCCCGTGTGCTCGCGCTGACTGC CCTTGCGCTCGCGACGCCCGCGCTAGCCGCCGAGGGATTCACCTCCGTCACCGCCAGTGGGGATGACGGCAACGTCCCCT CCAACGCCATCGACGGCGACCCCACCACGCGCTGGTCCAGCGACGGCGTGGGAGAATGGCTCACCGGCGACCTGGGCGCG GTGAAGTCACTCAGCGCCGTGGACATCTCCTGGCACCGTGGCAACGAGCGCGTCAATCGCTTCGTCATCTCCATCTCCAC GGACGGCACGAACTTCACGCAGGTGCACTCCGGCAGCTCGTCCGGCAACACCGCCGCGCCGGAGCGTTACTCGTTCTCCC CGGTGAACGCACGCTACGTGCGCATCACCGTGAACGGCAGCACGATGAACACCTGGGCCAGCATCGCGGAGCTGGCGGCC GTCACCGACGGCTCGAACCCGCCCGGCGCTCCCCCCGAGCGTTTCACCTCCGTCGCCGCCAGCGGAGATGACGGCAACGT CCCCGCCAACGCCATCGACGGCGACCCCGCCACGCGGTGGTCCAGCGACGGCGTGGGGCAATGGATTACCGGCGACCTGG GCACCGTGGCGCAGTTGGGCGCCATGGACATCGGCTGGCACCGTGGCAACGAGCGCGTCAACAACTTCGTCATCTCCACC TCCACGGACGGCACGACCTTCACGCAGGTGCATTCCGGCAGGTCATCCGGCAACACCGCCGCGCTGGAGCGCTACTCGTT CTCCCCAGTGAGCGCGCGCTACGTGCGCATCACCGTGAACGGCAGCACGATGAACACCTGGGCCAGCATCGCGGAAATGC AGCCCGGCACCGGCTCGACCCCGCCCACCAATCCGCCCACCGACCCGCCTGGCGAGCAGGGCCAGGACAAGTTCGGCGTG ACGATGATCTATCCGACCAGGTCGGGCGGCGAGCAGTGGTTCCTGGCGGACAACGCTACGTCCGACAAGCGCTTCGACCC GCAGAACACCATCAGCCGCAACTCGGACGGCTCATGGAAGATGAGGAACACCAAGGTGCGCATGTCCGTGTTCACCTCCA CGGGCTACAGCGCGTCCAAGATTCCGACCTACGACCGCGACGTGCTGGCCAGCCGGGGCTACATGCAGGCGGCGAACGAC TGGCGGAACATCGAGATGACTGGCTTCGTGAAGGTCAACTCGGTGTCCGACGTGTCGGACAACTTCGCGTGGTACGCGCG AGGCGGCAAGCACAACGACAACCACTCGGGGTGCGAGGGCAGCAGCTACAAGGGTTCGCTGCACTATGACGGCCGCGTGC GCTGGCAGAAGGAGACGTGGCACGTCTCCTACAACCAGGCGTCGTACAAGTCCGGTACCTCGGCGCTGCGCGGCCGCTGG GTGGGCTTCAAGTCGGTGATGCGCAACACCAAGGTCAACGGAAAGGAGGCCGTGCGCCTGGAGATGTACCTCAACGAGAA CGCCGACAAGAAGACCTGGAAGAAGGTCTACGACATGGTGGACTCGGGCAGTTGGGGTGGTGACGCCAGCCACTGCGGCG GCGCGGTGAACGCAATGCCCATCACTTGGGGCGGCCCCATCGCGGTGTTCCGCTGGGACAGCGCCAACGACGTGGACTTC AAGTGGCTGTCCGTGCGCGAAATCTCGCCGGAGCAGTGA
Upstream 100 bases:
>100_bases GTCTGAAAGCCAACGCGCCGCTGGGGGACCGCGGCGCGCCGGTCCGGCATCGTCCGCCCGGTGAGTCGTGGCTCCTGGTG GTCTCACTTGAGGTATCAAC
Downstream 100 bases:
>100_bases GCCGCTGACCACGTGACGCCCGCCCCGGTGCTCCTTCCTTGGAGTGCCGGGGCGTGGCGTTTTCAGGGCATTCGATGAGC GCCATCACCGGGGTCCGAGC
Product: F5/8 type C domain-containing protein
Products: NA
Alternate protein names: F5/8 Type C Domain-Containing Protein; Secreted Protein; Lipoprotein; Coagulation Factor 5/8 Type; Alginate Lyase; Cellulase; Alpha-L-Fucosidase; Poly(Beta-D-Mannuronate) Lyase; ATPase; Glycoside Hydrolase Family; Metallophosphoesterase; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; Glycoside Hydrolase
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGDPTTRWSSDGVGEWLTGDLGA VKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSSSGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAA VTDGSNPPGAPPERFTSVAASGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGSTPPTNPPTDPPGEQGQDKFGV TMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWKMRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAAND WRNIEMTGFVKVNSVSDVSDNFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMPITWGGPIAVFRWDSANDVDF KWLSVREISPEQ
Sequences:
>Translated_572_residues MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGDPTTRWSSDGVGEWLTGDLGA VKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSSSGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAA VTDGSNPPGAPPERFTSVAASGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGSTPPTNPPTDPPGEQGQDKFGV TMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWKMRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAAND WRNIEMTGFVKVNSVSDVSDNFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMPITWGGPIAVFRWDSANDVDF KWLSVREISPEQ >Mature_572_residues MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGDPTTRWSSDGVGEWLTGDLGA VKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSSSGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAA VTDGSNPPGAPPERFTSVAASGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGSTPPTNPPTDPPGEQGQDKFGV TMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWKMRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAAND WRNIEMTGFVKVNSVSDVSDNFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMPITWGGPIAVFRWDSANDVDF KWLSVREISPEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61956; Mature: 61956
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS50022 FA58C_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGD CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCCC PTTRWSSDGVGEWLTGDLGAVKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSS CCCCCCCCCCCCHHCCCHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCC SGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAAVTDGSNPPGAPPERFTSVAA CCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEC SGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCEEECEECCCCCCCEEEEEE STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGST CCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCC PPTNPPTDPPGEQGQDKFGVTMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWK CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCEE MRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAANDWRNIEMTGFVKVNSVSDVSD EECEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEECCCCCCCC NFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW CEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCHHHHEEC VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMP CCHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEE ITWGGPIAVFRWDSANDVDFKWLSVREISPEQ EECCCCEEEEEECCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MNPHHRTSSRGGWMHLREPARVLALTALALATPALAAEGFTSVTASGDDGNVPSNAIDGD CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCHHHHHCCCEEEEECCCCCCCCCCCCCCC PTTRWSSDGVGEWLTGDLGAVKSLSAVDISWHRGNERVNRFVISISTDGTNFTQVHSGSS CCCCCCCCCCCCHHCCCHHHHCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCC SGNTAAPERYSFSPVNARYVRITVNGSTMNTWASIAELAAVTDGSNPPGAPPERFTSVAA CCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEC SGDDGNVPANAIDGDPATRWSSDGVGQWITGDLGTVAQLGAMDIGWHRGNERVNNFVIST CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCEEECEECCCCCCCEEEEEE STDGTTFTQVHSGRSSGNTAALERYSFSPVSARYVRITVNGSTMNTWASIAEMQPGTGST CCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCC PPTNPPTDPPGEQGQDKFGVTMIYPTRSGGEQWFLADNATSDKRFDPQNTISRNSDGSWK CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCEE MRNTKVRMSVFTSTGYSASKIPTYDRDVLASRGYMQAANDWRNIEMTGFVKVNSVSDVSD EECEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEECCCCCCCC NFAWYARGGKHNDNHSGCEGSSYKGSLHYDGRVRWQKETWHVSYNQASYKSGTSALRGRW CEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCHHHHEEC VGFKSVMRNTKVNGKEAVRLEMYLNENADKKTWKKVYDMVDSGSWGGDASHCGGAVNAMP CCHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEE ITWGGPIAVFRWDSANDVDFKWLSVREISPEQ EECCCCEEEEEECCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA