| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757122
Identifier: 108757122
GI number: 108757122
Start: 4215249
End: 4216754
Strand: Direct
Name: 108757122
Synonym: MXAN_3613
Alternate gene names: NA
Gene position: 4215249-4216754 (Clockwise)
Preceding gene: 108760647
Following gene: 108758112
Centisome position: 46.12
GC content: 70.72
Gene sequence:
>1506_bases ATGATTGGCCTCGAGGTACGCGCCCGGATTCGCCAGTTGCACTACGCGGAAGGCTGGCCGGTGGGCACCATCGCCACGCA GCTGGGGCTGCACCACGACACCGTGGAGGCGGCCCTGGAGGACGCGCCGGTAGCCAGTGCTGACAGAAGCACGGCGAAGC CCACGGTGCTGGGCCCGTACACGGACTTCATTGACGTCACCCTCAAGGCCCACCCGCGCCTGAGGGCCACGCGCCTCTTC CACATGGTGAAGGCCCGTGGCTACCTGGGCGGCTATGAGCAGGTGAAGCGCTATGTGCGACGGGTGCGCCCAGGCCCCCA GGCCGAGGCCTTCTTGCGCCGCAATACCCTGCCGGGCGAAGAGGCCCAGGTGGACTGGGGCAGCTTCGGCAAGGTGCGGG TGGGGCGGGCCACCCGGACGCTCTCCTGCTTCGTCCTGGTGCTGGGCCACTCGCGCGCCATGTACGCGCGCTTCTTCCTG GGCCAAACCATGGAGTGCTTCCTCCAGGGCCACGTCCAAGCCTTCGAAGCGCTGGGCGGCGTGCCTCGCAACCTCCTCTA CGACAACCTGAAGTCCGTCGTGCTGCAGAGGGCCGGAGACGTCATTCACTTCCACCCGCGCATATTGGAAGCCGCCGGCC ACTACCACTTCGTCCCCAAGCCCTGCGCCCCCTACCGCGGCAATGAGAAGGGAAAGGTGGAGCGCACCATCCGCTACCTG CGCGACTCCTTCTTCTCCGCGCGCACCTTCCACAGCCTCGACGACGTCAACCGCCAACTGCAGCGCTGGGTGGAGGAGGT GGCCCACCAGCGCCGGGTGCCCGGCGACGCCTCGGGCCGCACGGTGGCGCAGGCCCTGGAAGCCGAGCGCTCCCTGCTGC TGCCGCTGCCCGCGCACCCGCTGCCCACCGACGTGGTGCGCCCCGCCGCCTCCGGCAAGACGCCCTACGTGCGCTTCGAC GGCAACGACTACTCCATTCCCGAGGGCCTGGTGCGCCGGCCCCTCACGCTGGTTGCCTCGTCCACCACGGTGCGCCTCCT CGACGGCGCCGTGGAAGCCGCCTCGCACGTGCGCAGCTGGGACAAGGGCGCCGTCGTCGAGGATGCCAGCCACCTGGCTG CCCTGGCCAGGCGCAAGGCCCACGCCCACGAGCTGCGTGGCAGGGACTTGCTGCGCGCACGCTGCCCGCACGCCGAGCAA CTCCTCCAGGCGCTCACCAGCCGCGGCGACAACCTCGGCAACCACACCGTGAAGCTGCTGGCGCTGGCCGACAGGTACGG CTCCGCCGAAACCGACGCCGCCATCGCCGAGACGCTCGCTCGCGGCGCACTCGGCCCCGCCGCCGTCGCCCACGTCCTTG ACCAACGCAGCCGCAAAAGGGGCGCCCCTCCGCCGCTGCCCCTCGTGCTGCCGGATGACCCGCGCGTGCGCGAGCAACGC GTCCCCCAGCACTCCCTCAACCCCTACGACGCCCTCCTCGGGCGCGACACGGAGCAAGTGCCATGA
Upstream 100 bases:
>100_bases GCTCACCATGCCCGGAACGGGTGCTCACCATGCCCGGAACGGGTGCTCACCTCGGGCCGGAATCGGTGCTCACCATGGTC CGGTACACGCAGGTGGGAGG
Downstream 100 bases:
>100_bases GCCCCTTGAAGGAACGCCTCAACACCCTGGGCCTGCATCACACCAGTGCCGCGCTCGATGACCTCATTGCCCTGGCCACC AAACGCAGGTGGGGCCCCAC
Product: IS21 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MIGLEVRARIRQLHYAEGWPVGTIATQLGLHHDTVEAALEDAPVASADRSTAKPTVLGPYTDFIDVTLKAHPRLRATRLF HMVKARGYLGGYEQVKRYVRRVRPGPQAEAFLRRNTLPGEEAQVDWGSFGKVRVGRATRTLSCFVLVLGHSRAMYARFFL GQTMECFLQGHVQAFEALGGVPRNLLYDNLKSVVLQRAGDVIHFHPRILEAAGHYHFVPKPCAPYRGNEKGKVERTIRYL RDSFFSARTFHSLDDVNRQLQRWVEEVAHQRRVPGDASGRTVAQALEAERSLLLPLPAHPLPTDVVRPAASGKTPYVRFD GNDYSIPEGLVRRPLTLVASSTTVRLLDGAVEAASHVRSWDKGAVVEDASHLAALARRKAHAHELRGRDLLRARCPHAEQ LLQALTSRGDNLGNHTVKLLALADRYGSAETDAAIAETLARGALGPAAVAHVLDQRSRKRGAPPPLPLVLPDDPRVREQR VPQHSLNPYDALLGRDTEQVP
Sequences:
>Translated_501_residues MIGLEVRARIRQLHYAEGWPVGTIATQLGLHHDTVEAALEDAPVASADRSTAKPTVLGPYTDFIDVTLKAHPRLRATRLF HMVKARGYLGGYEQVKRYVRRVRPGPQAEAFLRRNTLPGEEAQVDWGSFGKVRVGRATRTLSCFVLVLGHSRAMYARFFL GQTMECFLQGHVQAFEALGGVPRNLLYDNLKSVVLQRAGDVIHFHPRILEAAGHYHFVPKPCAPYRGNEKGKVERTIRYL RDSFFSARTFHSLDDVNRQLQRWVEEVAHQRRVPGDASGRTVAQALEAERSLLLPLPAHPLPTDVVRPAASGKTPYVRFD GNDYSIPEGLVRRPLTLVASSTTVRLLDGAVEAASHVRSWDKGAVVEDASHLAALARRKAHAHELRGRDLLRARCPHAEQ LLQALTSRGDNLGNHTVKLLALADRYGSAETDAAIAETLARGALGPAAVAHVLDQRSRKRGAPPPLPLVLPDDPRVREQR VPQHSLNPYDALLGRDTEQVP >Mature_501_residues MIGLEVRARIRQLHYAEGWPVGTIATQLGLHHDTVEAALEDAPVASADRSTAKPTVLGPYTDFIDVTLKAHPRLRATRLF HMVKARGYLGGYEQVKRYVRRVRPGPQAEAFLRRNTLPGEEAQVDWGSFGKVRVGRATRTLSCFVLVLGHSRAMYARFFL GQTMECFLQGHVQAFEALGGVPRNLLYDNLKSVVLQRAGDVIHFHPRILEAAGHYHFVPKPCAPYRGNEKGKVERTIRYL RDSFFSARTFHSLDDVNRQLQRWVEEVAHQRRVPGDASGRTVAQALEAERSLLLPLPAHPLPTDVVRPAASGKTPYVRFD GNDYSIPEGLVRRPLTLVASSTTVRLLDGAVEAASHVRSWDKGAVVEDASHLAALARRKAHAHELRGRDLLRARCPHAEQ LLQALTSRGDNLGNHTVKLLALADRYGSAETDAAIAETLARGALGPAAVAHVLDQRSRKRGAPPPLPLVLPDDPRVREQR VPQHSLNPYDALLGRDTEQVP
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012287 - InterPro: IPR017894 - InterPro: IPR001584 - InterPro: IPR006120 - InterPro: IPR012337 [H]
Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 55488; Mature: 55488
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLEVRARIRQLHYAEGWPVGTIATQLGLHHDTVEAALEDAPVASADRSTAKPTVLGPY CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCC TDFIDVTLKAHPRLRATRLFHMVKARGYLGGYEQVKRYVRRVRPGPQAEAFLRRNTLPGE CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCC EAQVDWGSFGKVRVGRATRTLSCFVLVLGHSRAMYARFFLGQTMECFLQGHVQAFEALGG CCCCCCCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPRNLLYDNLKSVVLQRAGDVIHFHPRILEAAGHYHFVPKPCAPYRGNEKGKVERTIRYL CHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHH RDSFFSARTFHSLDDVNRQLQRWVEEVAHQRRVPGDASGRTVAQALEAERSLLLPLPAHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCC LPTDVVRPAASGKTPYVRFDGNDYSIPEGLVRRPLTLVASSTTVRLLDGAVEAASHVRSW CCHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHCC DKGAVVEDASHLAALARRKAHAHELRGRDLLRARCPHAEQLLQALTSRGDNLGNHTVKLL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCHHEEEE ALADRYGSAETDAAIAETLARGALGPAAVAHVLDQRSRKRGAPPPLPLVLPDDPRVREQR EHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHC VPQHSLNPYDALLGRDTEQVP CCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MIGLEVRARIRQLHYAEGWPVGTIATQLGLHHDTVEAALEDAPVASADRSTAKPTVLGPY CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCC TDFIDVTLKAHPRLRATRLFHMVKARGYLGGYEQVKRYVRRVRPGPQAEAFLRRNTLPGE CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCC EAQVDWGSFGKVRVGRATRTLSCFVLVLGHSRAMYARFFLGQTMECFLQGHVQAFEALGG CCCCCCCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPRNLLYDNLKSVVLQRAGDVIHFHPRILEAAGHYHFVPKPCAPYRGNEKGKVERTIRYL CHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHH RDSFFSARTFHSLDDVNRQLQRWVEEVAHQRRVPGDASGRTVAQALEAERSLLLPLPAHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCC LPTDVVRPAASGKTPYVRFDGNDYSIPEGLVRRPLTLVASSTTVRLLDGAVEAASHVRSW CCHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHCC DKGAVVEDASHLAALARRKAHAHELRGRDLLRARCPHAEQLLQALTSRGDNLGNHTVKLL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCHHEEEE ALADRYGSAETDAAIAETLARGALGPAAVAHVLDQRSRKRGAPPPLPLVLPDDPRVREQR EHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHC VPQHSLNPYDALLGRDTEQVP CCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8382825 [H]