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The map label for this gene is rpiA [H]

Identifier: 108757006

GI number: 108757006

Start: 6832481

End: 6833191

Strand: Reverse

Name: rpiA [H]

Synonym: MXAN_5489

Alternate gene names: 108757006

Gene position: 6833191-6832481 (Counterclockwise)

Preceding gene: 108764097

Following gene: 108761591

Centisome position: 74.76

GC content: 73.84

Gene sequence:

>711_bases
ATGAGCCAGCAGGGCGACGGCGCGGCGACGGCCCGCTACAAACAAGCGGCCGCCGAATGGGCGGTGGACGGCTTCCTCCA
GCCGGGCATGGTGGTGGGCCTGGGCACGGGCAGCACCGCGGCCTTCGCCGTCCAGCGGCTGGCCGCGCTGCGCGCGCAGG
GACGGCTTCTGGACATCGTGGGCGTGCCCACCTCGCGCGCCACGGAGGCGCTGGCTCGCTCGCTGGGCGTGCCCGTGTCG
ACGTTGGACGCGCACCCCGTGCTGGACGTCACCCTCGACGGCGCGGACGAAGTGGCGCCGGACCTGTCGCTCATCAAGGG
CGGAGGTGGCGCGCTGCTGCGCGAGAAGATCGTCGCGCAAGCAAGCCGGCGCGTCGTCATCGTGGTGGACGCGGGAAAGC
TCTCCCCCGTGCTGGGCACGCACTGGCCGGTGCCGGTGGAGGTGATGTCCTTCGGTTGGCGCTCCCAGGCGCGGTTCCTC
GAATCGCTTGGCGCGCGCGTCACCGTCCGGCAGGGCGCTGGCGGCGAGCCCTTCCTCACGGACCAGGGCAACCTCGTGCT
CGACTGCGCCTTCGGCCCCATCGACGCGCCCGCGGCGCTGGCCGCGAGCCTGGGCGCGCGCGCGGGAATCATGGGCCACG
GCTTGTTCCTGAACCTCGCCACGGACCTGGTGGTGGCGGGGCCGGAGGGCGTGGAGCACCGCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGAGGGGACTCCAAGGGCCTCTGAGCCATTCGCCGTCCAGCACGGGACATCGTCGCGCGGGGACATCAGCCACCGCGCGC
CGCCGCGCTACGCTTCCGCC

Downstream 100 bases:

>100_bases
TGTCAACGCGGTGTGAGCGCGCACCCAGAGTCCTCTCTCACCCAGAAGGCAAACAGTGGCAACGTAGGCGATTGTATGGC
CAGTTTATTCTGCAATCCTT

Product: ribose-5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSQQGDGAATARYKQAAAEWAVDGFLQPGMVVGLGTGSTAAFAVQRLAALRAQGRLLDIVGVPTSRATEALARSLGVPVS
TLDAHPVLDVTLDGADEVAPDLSLIKGGGGALLREKIVAQASRRVVIVVDAGKLSPVLGTHWPVPVEVMSFGWRSQARFL
ESLGARVTVRQGAGGEPFLTDQGNLVLDCAFGPIDAPAALAASLGARAGIMGHGLFLNLATDLVVAGPEGVEHRAR

Sequences:

>Translated_236_residues
MSQQGDGAATARYKQAAAEWAVDGFLQPGMVVGLGTGSTAAFAVQRLAALRAQGRLLDIVGVPTSRATEALARSLGVPVS
TLDAHPVLDVTLDGADEVAPDLSLIKGGGGALLREKIVAQASRRVVIVVDAGKLSPVLGTHWPVPVEVMSFGWRSQARFL
ESLGARVTVRQGAGGEPFLTDQGNLVLDCAFGPIDAPAALAASLGARAGIMGHGLFLNLATDLVVAGPEGVEHRAR
>Mature_235_residues
SQQGDGAATARYKQAAAEWAVDGFLQPGMVVGLGTGSTAAFAVQRLAALRAQGRLLDIVGVPTSRATEALARSLGVPVST
LDAHPVLDVTLDGADEVAPDLSLIKGGGGALLREKIVAQASRRVVIVVDAGKLSPVLGTHWPVPVEVMSFGWRSQARFLE
SLGARVTVRQGAGGEPFLTDQGNLVLDCAFGPIDAPAALAASLGARAGIMGHGLFLNLATDLVVAGPEGVEHRAR

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=211, Percent_Identity=36.9668246445498, Blast_Score=132, Evalue=2e-31,
Organism=Escherichia coli, GI1789280, Length=220, Percent_Identity=38.1818181818182, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17551758, Length=223, Percent_Identity=35.8744394618834, Blast_Score=120, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6324669, Length=230, Percent_Identity=31.304347826087, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281364072, Length=198, Percent_Identity=35.8585858585859, Blast_Score=113, Evalue=1e-25,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 24215; Mature: 24084

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQGDGAATARYKQAAAEWAVDGFLQPGMVVGLGTGSTAAFAVQRLAALRAQGRLLDIV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEE
GVPTSRATEALARSLGVPVSTLDAHPVLDVTLDGADEVAPDLSLIKGGGGALLREKIVAQ
ECCCHHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHCCCCEEEECCCCHHHHHHHHHH
ASRRVVIVVDAGKLSPVLGTHWPVPVEVMSFGWRSQARFLESLGARVTVRQGAGGEPFLT
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCEEE
DQGNLVLDCAFGPIDAPAALAASLGARAGIMGHGLFLNLATDLVVAGPEGVEHRAR
CCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHCHHHEEEHHHEEEECCCCCCCCCC
>Mature Secondary Structure 
SQQGDGAATARYKQAAAEWAVDGFLQPGMVVGLGTGSTAAFAVQRLAALRAQGRLLDIV
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEE
GVPTSRATEALARSLGVPVSTLDAHPVLDVTLDGADEVAPDLSLIKGGGGALLREKIVAQ
ECCCHHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHCCCCEEEECCCCHHHHHHHHHH
ASRRVVIVVDAGKLSPVLGTHWPVPVEVMSFGWRSQARFLESLGARVTVRQGAGGEPFLT
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCEEE
DQGNLVLDCAFGPIDAPAALAASLGARAGIMGHGLFLNLATDLVVAGPEGVEHRAR
CCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHCHHHEEEHHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA