| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756945
Identifier: 108756945
GI number: 108756945
Start: 4551006
End: 4552487
Strand: Reverse
Name: 108756945
Synonym: MXAN_3786
Alternate gene names: NA
Gene position: 4552487-4551006 (Counterclockwise)
Preceding gene: 108758357
Following gene: 108763708
Centisome position: 49.81
GC content: 67.88
Gene sequence:
>1482_bases GTGTACCAGGGAGGCAGGCGTCCGCTCGCTTCATGGTTGTGCATTCCCGATTGCGCGCGGGCCATCCCCGGACATGATGG TTGCGTGGATGCCCGCATCGTCGAGTTCGCCGAGGTCCTTCGCCAGAACGGTGTGCGTGTCAGTACGTCCGAGGTCCAGG ACGCGCTGCGCGCCACGTCCGAGGTAGGCCTCAAGGATCGGAACCTGTTCCGTTCGGTGCTCCGCACCACGCTGGTGAAG CGCGAGCTGGACGTGGACACCTTCAACCGGGCCTTCGAGTTCTACTTCTCCGGCGCGGCGAGGACGTTCGAGGACATCGA CAAGTCGCTGGCGCAGCAGTTGGAGGAGGAAGGCTACCTGGAGGGCGACCTGCTGAAGATGGTCCTCATCCAGATGCACC AGCTCCTCCCGGAGATGTCCCCCCTGGCCCAGGCCGTGCTGATGGGAGACCGGGCCCGGCTGGCGCAGATCTTCCGGATG GCTTCGCTGCAGTTGGACCTGTCGCGGATGGAGAGCCCGCTCCAGGCCGGGTTCTTCTCCCGGCGCATGCTGGCGGCGGC TGGGGCGGACAAGGCCCGGAACGACATGAAGTCGCTCGAAGACGAGCTGCGAGCCCGCGGCCTCACCCCGGAAGGGGTGG AGATTGTCTCGCGCCATGTCGCGGCCGCGATGCGGAAGATCGAGGACGCCGCCCGCCAGGAAGTGAAGCGCCAGGCGGAG GCCCGCATCCGCCGCCGCACCGACTCCGCCGCGGACAAGCCGCTGCACCTGCTCACCCAGGCGGAGGTGGACCAGATGGA GTCCGCCGTGCGCACCCTGGCGGAGAAGCTGCGCAGCCGGCTCATCCGGAAGCAGCGCTCGCACCGCAAGGGCGCCCTCA ACGTGCGGCGCACGCTGCGCCGGAACCTGCCGTGGGGCGGGGTGCCCATGGTGCCCCAGTTCCGCAGTCGCCGCCCCGAG CGCCCGGAGCTGGTGGTGCTCTGCGACGTGTCCGACTCCGTCCGTCAGGCCTCACGGATGATGCTGCTGTTCATGCACAC GATGCAGTCGCTCTTCGTCCGCGTGCGCTCGTTCGTCTTCGTGTCCGACGTGGGCGAGGTGACGCAGTACTTCAAGGACC TGGAGGTCGACGCCGCCATCGATATGGCCACCGCGGGCAAGACGGTGTCCCTGAGCGCGAACTCCAACTACGGCCGCGCC CTGGCCGACTTCACCCGGGACCACCTGGGCAGCATCACCCGCCGGACCACCGTGATGGTGATTGGCGACGGGCGGAACAA CTACAACGCGAACAACGCCTGGGCCCTCAAGGACCTGCGCCGCAAGGCGAAGCGGCTCTTGTGGATCTGCCCCGAGGAGC GTGGCAACTGGGGCATTGGCGACAGCGAGATGCTCACCTACGAGAAGCACTGTCACCAGGCCGTCGTCGTCACCTCCGTG TCGGACCTGGCCCGGATCGCCGACCAGCTCGTGCCCGCGTAG
Upstream 100 bases:
>100_bases GGCTACGGCTTGCCCGATTCCCCTCTGAAACCGCAGTGGGTGGATCGCGACCGCAGTCTTGAATAAGCGGTAATTCACTA AATTTTAGTGATTACACCGC
Downstream 100 bases:
>100_bases TCCCGGGCCCATTCCCCCCCCGCAAGGCACCTCCCCATGTCTTCCTTCCTCTTCGACGACAACGGCTTCCAGGACGTCCC CAACCGGGAGTCGTCCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like Protein; Von Willebrand Factor Type A Domain-Containing Protein; VWA Domain-Containing Protein; VWA Domain Protein
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MYQGGRRPLASWLCIPDCARAIPGHDGCVDARIVEFAEVLRQNGVRVSTSEVQDALRATSEVGLKDRNLFRSVLRTTLVK RELDVDTFNRAFEFYFSGAARTFEDIDKSLAQQLEEEGYLEGDLLKMVLIQMHQLLPEMSPLAQAVLMGDRARLAQIFRM ASLQLDLSRMESPLQAGFFSRRMLAAAGADKARNDMKSLEDELRARGLTPEGVEIVSRHVAAAMRKIEDAARQEVKRQAE ARIRRRTDSAADKPLHLLTQAEVDQMESAVRTLAEKLRSRLIRKQRSHRKGALNVRRTLRRNLPWGGVPMVPQFRSRRPE RPELVVLCDVSDSVRQASRMMLLFMHTMQSLFVRVRSFVFVSDVGEVTQYFKDLEVDAAIDMATAGKTVSLSANSNYGRA LADFTRDHLGSITRRTTVMVIGDGRNNYNANNAWALKDLRRKAKRLLWICPEERGNWGIGDSEMLTYEKHCHQAVVVTSV SDLARIADQLVPA
Sequences:
>Translated_493_residues MYQGGRRPLASWLCIPDCARAIPGHDGCVDARIVEFAEVLRQNGVRVSTSEVQDALRATSEVGLKDRNLFRSVLRTTLVK RELDVDTFNRAFEFYFSGAARTFEDIDKSLAQQLEEEGYLEGDLLKMVLIQMHQLLPEMSPLAQAVLMGDRARLAQIFRM ASLQLDLSRMESPLQAGFFSRRMLAAAGADKARNDMKSLEDELRARGLTPEGVEIVSRHVAAAMRKIEDAARQEVKRQAE ARIRRRTDSAADKPLHLLTQAEVDQMESAVRTLAEKLRSRLIRKQRSHRKGALNVRRTLRRNLPWGGVPMVPQFRSRRPE RPELVVLCDVSDSVRQASRMMLLFMHTMQSLFVRVRSFVFVSDVGEVTQYFKDLEVDAAIDMATAGKTVSLSANSNYGRA LADFTRDHLGSITRRTTVMVIGDGRNNYNANNAWALKDLRRKAKRLLWICPEERGNWGIGDSEMLTYEKHCHQAVVVTSV SDLARIADQLVPA >Mature_493_residues MYQGGRRPLASWLCIPDCARAIPGHDGCVDARIVEFAEVLRQNGVRVSTSEVQDALRATSEVGLKDRNLFRSVLRTTLVK RELDVDTFNRAFEFYFSGAARTFEDIDKSLAQQLEEEGYLEGDLLKMVLIQMHQLLPEMSPLAQAVLMGDRARLAQIFRM ASLQLDLSRMESPLQAGFFSRRMLAAAGADKARNDMKSLEDELRARGLTPEGVEIVSRHVAAAMRKIEDAARQEVKRQAE ARIRRRTDSAADKPLHLLTQAEVDQMESAVRTLAEKLRSRLIRKQRSHRKGALNVRRTLRRNLPWGGVPMVPQFRSRRPE RPELVVLCDVSDSVRQASRMMLLFMHTMQSLFVRVRSFVFVSDVGEVTQYFKDLEVDAAIDMATAGKTVSLSANSNYGRA LADFTRDHLGSITRRTTVMVIGDGRNNYNANNAWALKDLRRKAKRLLWICPEERGNWGIGDSEMLTYEKHCHQAVVVTSV SDLARIADQLVPA
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55727; Mature: 55727
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQGGRRPLASWLCIPDCARAIPGHDGCVDARIVEFAEVLRQNGVRVSTSEVQDALRATS CCCCCCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH EVGLKDRNLFRSVLRTTLVKRELDVDTFNRAFEFYFSGAARTFEDIDKSLAQQLEEEGYL HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC EGDLLKMVLIQMHQLLPEMSPLAQAVLMGDRARLAQIFRMASLQLDLSRMESPLQAGFFS CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RRMLAAAGADKARNDMKSLEDELRARGLTPEGVEIVSRHVAAAMRKIEDAARQEVKRQAE HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIRRRTDSAADKPLHLLTQAEVDQMESAVRTLAEKLRSRLIRKQRSHRKGALNVRRTLR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RNLPWGGVPMVPQFRSRRPERPELVVLCDVSDSVRQASRMMLLFMHTMQSLFVRVRSFVF HCCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSDVGEVTQYFKDLEVDAAIDMATAGKTVSLSANSNYGRALADFTRDHLGSITRRTTVMV HHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEE IGDGRNNYNANNAWALKDLRRKAKRLLWICPEERGNWGIGDSEMLTYEKHCHQAVVVTSV EECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SDLARIADQLVPA HHHHHHHHHHCCC >Mature Secondary Structure MYQGGRRPLASWLCIPDCARAIPGHDGCVDARIVEFAEVLRQNGVRVSTSEVQDALRATS CCCCCCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH EVGLKDRNLFRSVLRTTLVKRELDVDTFNRAFEFYFSGAARTFEDIDKSLAQQLEEEGYL HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC EGDLLKMVLIQMHQLLPEMSPLAQAVLMGDRARLAQIFRMASLQLDLSRMESPLQAGFFS CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RRMLAAAGADKARNDMKSLEDELRARGLTPEGVEIVSRHVAAAMRKIEDAARQEVKRQAE HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIRRRTDSAADKPLHLLTQAEVDQMESAVRTLAEKLRSRLIRKQRSHRKGALNVRRTLR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RNLPWGGVPMVPQFRSRRPERPELVVLCDVSDSVRQASRMMLLFMHTMQSLFVRVRSFVF HCCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSDVGEVTQYFKDLEVDAAIDMATAGKTVSLSANSNYGRALADFTRDHLGSITRRTTVMV HHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEE IGDGRNNYNANNAWALKDLRRKAKRLLWICPEERGNWGIGDSEMLTYEKHCHQAVVVTSV EECCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SDLARIADQLVPA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA