| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756860
Identifier: 108756860
GI number: 108756860
Start: 4013494
End: 4014603
Strand: Direct
Name: 108756860
Synonym: MXAN_3448
Alternate gene names: NA
Gene position: 4013494-4014603 (Clockwise)
Preceding gene: 108757888
Following gene: 108758900
Centisome position: 43.91
GC content: 75.68
Gene sequence:
>1110_bases ATGACGCCCTTCGTCCGCCGTTTCGTCGCTGTGCCGATGCTCGCCCTGTCCGGGGCGTGCACGTCCGGTTCTTCCACCGC GGAGGTTCCTCCCGCGCCGCCCCCCGCGCGCGCCTCCGCGCCTTCGGCGTGGGTGCCCGTGCGCGCGGCGTCTCGCGTGG CCCTGGCGGAGGCCCCCGCGCTGGTGCTGTCCAGCCCGGACGCCGTCGCCGCGCTCTCCGCGCCGTTCCGCGCCCGAGTG CAGCAGGTGCGCGCGCGGCCGGGTCAGCAAGTCAAGGCGGGAGACCCGCTGGTGGAGGTGCTGATGCCGGAGGTGGTGGA GGCGGCGGGGGCCGCCAGCGCCGCCTCGCTGAGGCTGGAGGCCTATTCGCGGCAGGTGGAGCGCCTGGAGGCGCTTCATG CCCAGGGGCTGGCGAAGCTGCCCGACCTGGCCGACGCCCAGACGCAACAGGCCGAGGCCCGCGCCGCCCTGGTCGCGGCG CACGCGGTGTTGCGCGTGGCGGGCATCGCTCCCGGGGAAGCCCGGGGCGTGGCGGAGCGTGGCACCGTCTGGCTCAAGAG CCCCATCGGAGGAATCGTCACCGAGGTGCGCGCGGTGCTGGGGGAGATGCAGCCCGAGGCCAGTGCCGCCTTGGTGCGGG TGGCCGCTGACGGCCCCGCGCGCCTGGAGGCCCGCCTGTCCGTGCGTCCTCCCGAGGACGCCAGCTTCGCCTTCGTGTCG TCCCAGGGCATCGCTGTTCCGGTGCGGTGGGTGGGCCAGTCCCCGGTCGTGGACGCCGCGGATGGAACGTGGCGCGCATG GTTCGAGCCAGAGGACACCGCCGCCGTGCTGCGCGCGGGGCAGGGGGGCCGGTTGCGCATCCAGGCCGCGGCGGGCGAGG ACACGGTGCTGGTCCCGGCGCGCGCCCTGGCCTTCGACAGTGCGCGCACGGTCGTCTTCACGCGCGGCGGCGAGGGGCAG CCCGTGCGCCGGGAGGTGGAGGTGCTGGCCACTTCCGGCGCGGAGGCCTTGGTGAAAGGGCCGCTGTCTGCCCGGGACAC GGTCGCCGCTGACGGCGCGGCGCTGCTGTTGGAGTCTCAGGCCGGTGACGCCGATGAGGTGACGCCGTGA
Upstream 100 bases:
>100_bases CCCGCCGCGCCCGGGCCGCCGCCAACATCCGGCTCGCGCTCGCTCGTGGCGAAGCCTCGCTCGCCGCCGCGCGGCTCCAC CTCCTGCTCTCCGCTCTGCC
Downstream 100 bases:
>100_bases TTGAAGCCCTCGTGCGCTGGTCGGTGCGTCACCGGGTCTGGGTCCTGGTCCTCACGGGCGTGCTCGCGCTGGCGGGCGTC GCGGTGTCGCTCCGCCTGGA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTPFVRRFVAVPMLALSGACTSGSSTAEVPPAPPPARASAPSAWVPVRAASRVALAEAPALVLSSPDAVAALSAPFRARV QQVRARPGQQVKAGDPLVEVLMPEVVEAAGAASAASLRLEAYSRQVERLEALHAQGLAKLPDLADAQTQQAEARAALVAA HAVLRVAGIAPGEARGVAERGTVWLKSPIGGIVTEVRAVLGEMQPEASAALVRVAADGPARLEARLSVRPPEDASFAFVS SQGIAVPVRWVGQSPVVDAADGTWRAWFEPEDTAAVLRAGQGGRLRIQAAAGEDTVLVPARALAFDSARTVVFTRGGEGQ PVRREVEVLATSGAEALVKGPLSARDTVAADGAALLLESQAGDADEVTP
Sequences:
>Translated_369_residues MTPFVRRFVAVPMLALSGACTSGSSTAEVPPAPPPARASAPSAWVPVRAASRVALAEAPALVLSSPDAVAALSAPFRARV QQVRARPGQQVKAGDPLVEVLMPEVVEAAGAASAASLRLEAYSRQVERLEALHAQGLAKLPDLADAQTQQAEARAALVAA HAVLRVAGIAPGEARGVAERGTVWLKSPIGGIVTEVRAVLGEMQPEASAALVRVAADGPARLEARLSVRPPEDASFAFVS SQGIAVPVRWVGQSPVVDAADGTWRAWFEPEDTAAVLRAGQGGRLRIQAAAGEDTVLVPARALAFDSARTVVFTRGGEGQ PVRREVEVLATSGAEALVKGPLSARDTVAADGAALLLESQAGDADEVTP >Mature_368_residues TPFVRRFVAVPMLALSGACTSGSSTAEVPPAPPPARASAPSAWVPVRAASRVALAEAPALVLSSPDAVAALSAPFRARVQ QVRARPGQQVKAGDPLVEVLMPEVVEAAGAASAASLRLEAYSRQVERLEALHAQGLAKLPDLADAQTQQAEARAALVAAH AVLRVAGIAPGEARGVAERGTVWLKSPIGGIVTEVRAVLGEMQPEASAALVRVAADGPARLEARLSVRPPEDASFAFVSS QGIAVPVRWVGQSPVVDAADGTWRAWFEPEDTAAVLRAGQGGRLRIQAAAGEDTVLVPARALAFDSARTVVFTRGGEGQP VRREVEVLATSGAEALVKGPLSARDTVAADGAALLLESQAGDADEVTP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37889; Mature: 37758
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFVRRFVAVPMLALSGACTSGSSTAEVPPAPPPARASAPSAWVPVRAASRVALAEAPA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCE LVLSSPDAVAALSAPFRARVQQVRARPGQQVKAGDPLVEVLMPEVVEAAGAASAASLRLE EEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH AYSRQVERLEALHAQGLAKLPDLADAQTQQAEARAALVAAHAVLRVAGIAPGEARGVAER HHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHC GTVWLKSPIGGIVTEVRAVLGEMQPEASAALVRVAADGPARLEARLSVRPPEDASFAFVS CCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEE SQGIAVPVRWVGQSPVVDAADGTWRAWFEPEDTAAVLRAGQGGRLRIQAAAGEDTVLVPA CCCCEEEEEECCCCCCEECCCCCEEEECCCCCHHHHHCCCCCCEEEEEEECCCCEEEECH RALAFDSARTVVFTRGGEGQPVRREVEVLATSGAEALVKGPLSARDTVAADGAALLLESQ HHHEECCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEECC AGDADEVTP CCCCCCCCC >Mature Secondary Structure TPFVRRFVAVPMLALSGACTSGSSTAEVPPAPPPARASAPSAWVPVRAASRVALAEAPA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCE LVLSSPDAVAALSAPFRARVQQVRARPGQQVKAGDPLVEVLMPEVVEAAGAASAASLRLE EEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH AYSRQVERLEALHAQGLAKLPDLADAQTQQAEARAALVAAHAVLRVAGIAPGEARGVAER HHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHC GTVWLKSPIGGIVTEVRAVLGEMQPEASAALVRVAADGPARLEARLSVRPPEDASFAFVS CCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEE SQGIAVPVRWVGQSPVVDAADGTWRAWFEPEDTAAVLRAGQGGRLRIQAAAGEDTVLVPA CCCCEEEEEECCCCCCEECCCCCEEEECCCCCHHHHHCCCCCCEEEEEEECCCCEEEECH RALAFDSARTVVFTRGGEGQPVRREVEVLATSGAEALVKGPLSARDTVAADGAALLLESQ HHHEECCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEECC AGDADEVTP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA