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The map label for this gene is ubiA [H]

Identifier: 108563732

GI number: 108563732

Start: 1352826

End: 1353710

Strand: Reverse

Name: ubiA [H]

Synonym: HPAG1_1307

Alternate gene names: 108563732

Gene position: 1353710-1352826 (Counterclockwise)

Preceding gene: 108563733

Following gene: 108563731

Centisome position: 84.8

GC content: 41.24

Gene sequence:

>885_bases
TTGCTTAAAAAAATCACGCACAAAATCAAAGCTTTAAGCGAATTGGTCGCTTTGGAGCATACGATATTTTCTAGCATGTT
TTTACTCATGGCTATGGTCATAAGCTCTTATCAAAAAAATCAAACGCTCTTTTTTGGGTTAGAAACCTTAATCCTTTGTT
TTTTAGCCTTATTAGGGGCAAGAAACTTCGCTATGGGGTTTAACCGCTTGGTGGATAGAGATATTGACAAGGATAACCCA
AGGACGAAAAACCGCCCGAGCGTGGATGGCCGGATCAGCGTTAAAGGCATGGTGGTTTTTAGCGCTTCAAACGCTCTTTT
ATTCGTGGTGGTGAGCTATTTCATCAACCCTTTAGCCTTCAAGCTTTCGTTACCTTTTTTAATCGTTTTAGGGGGGTATT
CGTATTTCAAGCGCTTTTCTTCTTTGGCGCATTTCATCGTGGGTTTGGCTTTGGGTTTGGCCCCCATTGCGGGAAGTGTG
GCGGTTTTAGGGGATATTCCTTTATGGAATGTCTTTTTGGCTTTAGGGGTGATGCTATGGGTGGCTGGGTTTGATTTGCT
CTATTCTTTACAGGATATGGAGTTTGATAAAGAGAGAGGCTTGTTTTCCATTCCTAGTCAATTAGGGGAAAAATGGTGTT
TGAATCTTTCAAGGCTCTCACACCTTGCAGCGCTAATGTGCTGGCTTTGTTTTGTGAAATGCTACCATGGGGGGCTTTTT
GCGTATTTAGGATTAGGGGTTTCAGCCTTGATTTTACTCTATGAGCAGATCTTAGTGACTAGAGATTATAAAAACATTCC
TAAAGCCTTTTTTGTGAGTAATGGCTATTTGGGGGTGGTGTTTTTTATTTTTATTGTCCTTGATGTGGGGTTTAAGCATG
CATGA

Upstream 100 bases:

>100_bases
GTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCAATATATTATAATGCCTAGCTCAATTGTAGGTTAGAAAAGTCA
TTTTATTAGGGATCAAATAA

Downstream 100 bases:

>100_bases
GTTGGTTTTAAGATCCCAAGCTTTAGGGTTTGAAACGCGCTTAGTCCAATGCGATTTATCGTTCTCTTATGAAAGGTTTA
TCTCTAAAAGTAAACGCTCT

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLKKITHKIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNP
RTKNRPSVDGRISVKGMVVFSASNALLFVVVSYFINPLAFKLSLPFLIVLGGYSYFKRFSSLAHFIVGLALGLAPIAGSV
AVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLAALMCWLCFVKCYHGGLF
AYLGLGVSALILLYEQILVTRDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA

Sequences:

>Translated_294_residues
MLKKITHKIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNP
RTKNRPSVDGRISVKGMVVFSASNALLFVVVSYFINPLAFKLSLPFLIVLGGYSYFKRFSSLAHFIVGLALGLAPIAGSV
AVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLAALMCWLCFVKCYHGGLF
AYLGLGVSALILLYEQILVTRDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA
>Mature_294_residues
MLKKITHKIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNP
RTKNRPSVDGRISVKGMVVFSASNALLFVVVSYFINPLAFKLSLPFLIVLGGYSYFKRFSSLAHFIVGLALGLAPIAGSV
AVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLAALMCWLCFVKCYHGGLF
AYLGLGVSALILLYEQILVTRDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 32858; Mature: 32858

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKITHKIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
RNFAMGFNRLVDRDIDKDNPRTKNRPSVDGRISVKGMVVFSASNALLFVVVSYFINPLAF
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHH
KLSLPFLIVLGGYSYFKRFSSLAHFIVGLALGLAPIAGSVAVLGDIPLWNVFLALGVMLW
HHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH
VAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLAALMCWLCFVKCYHGGLF
HHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
AYLGLGVSALILLYEQILVTRDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA
HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKKITHKIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
RNFAMGFNRLVDRDIDKDNPRTKNRPSVDGRISVKGMVVFSASNALLFVVVSYFINPLAF
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHH
KLSLPFLIVLGGYSYFKRFSSLAHFIVGLALGLAPIAGSVAVLGDIPLWNVFLALGVMLW
HHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH
VAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLAALMCWLCFVKCYHGGLF
HHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
AYLGLGVSALILLYEQILVTRDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA
HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA