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The map label for this gene is ygaZ [C]

Identifier: 108563701

GI number: 108563701

Start: 1324045

End: 1324731

Strand: Reverse

Name: ygaZ [C]

Synonym: HPAG1_1276

Alternate gene names: 108563701

Gene position: 1324731-1324045 (Counterclockwise)

Preceding gene: 108563702

Following gene: 108563700

Centisome position: 82.98

GC content: 39.45

Gene sequence:

>687_bases
ATGCATGAGTTTCTAAAAGCCTTCAAAGACGCTTTCCCTCATACCATTTCTATCTTTTTAGGGTATTTGCTTATGGGAAT
GACTTTTGGAATGCTTTTAGTCCAGCATGGCTATGATTATAAAGTCGCTTTGTTCATGTCGTTATTCATCTATGCTGGGG
CGGTGCAGTTTGTAGCGATCACGCTTTTAAGCGCGCAAGCGAGTTTGATGAATGTCGTTATTGTGAGCTTGCTAGTGAAT
GCGAGACAGACTTGTTATGCGCTTTCTATGCTAGATAGATTTAAAAACACTAAATGGCGTTTGCCCTATTTAGCGCACGC
GCTCACGGATGAAACCTTTGCTTTATTGAATTTATACGCTCCTAAAGAGGGGGTTAGTGAAAAAGACTTTATTTTTAGCA
TTTCCTTACTCAACCACTCTTATTGGATTTTTGGTTCGTTGGTGGGTTCGTTGGTGGGTTCGCATTTTTCTTTTGACACT
CAAGGCATGGAATTTGTGATGACAGCGATTTTTATCGTGCTGTTTATGGAACAATACAAACGCACCACGAATCATAAAAA
CGCATGGCTTGGGATTTTTATTGCGGTTGTTTGTTTAGCGCTCTTTGGGACTGAATATTTTTTGCTCATCGCTTTAGTTT
TAATGGTGCTTGCTCTTATTTTGTTTAGGAAGCAGTTAGAATGTTAA

Upstream 100 bases:

>100_bases
AAATTGCATGCGAGTTTTGGCTATGAGGGCGAGCCGCATAAAAGCGTTTTAGAAACCTGTATTTCTAAAATTAAAGACTG
GTTCAAATAAAAGGTTGTTG

Downstream 100 bases:

>100_bases
TGCATTCTATACTCATTATTTTAGTCATCATATTAACGACTTATTTCACGCGCATTTGGCCTTTTATGGTGTTTAATTCT
AAAAACCCGCCCAACGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MHEFLKAFKDAFPHTISIFLGYLLMGMTFGMLLVQHGYDYKVALFMSLFIYAGAVQFVAITLLSAQASLMNVVIVSLLVN
ARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGSHFSFDT
QGMEFVMTAIFIVLFMEQYKRTTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC

Sequences:

>Translated_228_residues
MHEFLKAFKDAFPHTISIFLGYLLMGMTFGMLLVQHGYDYKVALFMSLFIYAGAVQFVAITLLSAQASLMNVVIVSLLVN
ARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGSHFSFDT
QGMEFVMTAIFIVLFMEQYKRTTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC
>Mature_228_residues
MHEFLKAFKDAFPHTISIFLGYLLMGMTFGMLLVQHGYDYKVALFMSLFIYAGAVQFVAITLLSAQASLMNVVIVSLLVN
ARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGSHFSFDT
QGMEFVMTAIFIVLFMEQYKRTTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=188, Percent_Identity=26.063829787234, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25927; Mature: 25927

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEFLKAFKDAFPHTISIFLGYLLMGMTFGMLLVQHGYDYKVALFMSLFIYAGAVQFVAI
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
PKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYK
CCCCCCCCHHHEEHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEFLKAFKDAFPHTISIFLGYLLMGMTFGMLLVQHGYDYKVALFMSLFIYAGAVQFVAI
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
PKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYK
CCCCCCCCHHHEEHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]