Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 108563567

GI number: 108563567

Start: 1210433

End: 1210963

Strand: Reverse

Name: nusG [H]

Synonym: HPAG1_1142

Alternate gene names: 108563567

Gene position: 1210963-1210433 (Counterclockwise)

Preceding gene: 108563568

Following gene: 108563566

Centisome position: 75.86

GC content: 39.92

Gene sequence:

>531_bases
ATGATGGATTGGTATGCCATACAAACTTATTCAGGGAGCGAGCAGTCCGTTAAGAAAGCGATTGAGAATCTAGCGAACGA
CCATAATATAAGAGATAGGATACAAGAGATCATTGTGCCTACTGAAGATATTATAGAGGTTTCTAAAAAAAGCAAGACGA
AAGTAACGGAACGAAGCCTTTATCCTGGATATGTTTTTATTAAAGTGGATTTAGATACGGTTTTGTGGCACAAGATACAA
TCTTTGCCAAGAGTGAGTCGTTTCATTGGAGAAAACAAAAAGCCAACCCCATTGAGTGAAGCGGATATTGGGCATATTTT
AGAAAAAATGAATAACCGAGCAGCCCCCAAGCCAAAAATCTTTTTTGAGCAAGGCGAAGTGGTGCGTGTGGTGGAAGGCC
CCTTTGCAAACTTTACCGCTACGGTGGAAGAGTATGATGTGGAACACCGCAAGCTCAAGCTCAATGTTTCTATTTTTGGT
AGGAACACTCCAATAGAGATTTTGCATTCGCAAGTGGAAAAAATTATATAA

Upstream 100 bases:

>100_bases
TGGTGAGTGCTATCACGCTGTTTTTAGCTTTGTTGGATTTTTCTCTAGGGGCTTTTGTCTCTAGTGTTCTATAGGTTGGT
GGCTTTAAATAAGGAGAATA

Downstream 100 bases:

>100_bases
CTTTTTAAGGAGAAAACATGGCTAAAAAAGTAGTCGGAGAAATCAAACTTCAAATCCCTGCCGGTAAGGCAAACCCTTCA
CCTCCCGTAGGGCCAGCTTT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MMDWYAIQTYSGSEQSVKKAIENLANDHNIRDRIQEIIVPTEDIIEVSKKSKTKVTERSLYPGYVFIKVDLDTVLWHKIQ
SLPRVSRFIGENKKPTPLSEADIGHILEKMNNRAAPKPKIFFEQGEVVRVVEGPFANFTATVEEYDVEHRKLKLNVSIFG
RNTPIEILHSQVEKII

Sequences:

>Translated_176_residues
MMDWYAIQTYSGSEQSVKKAIENLANDHNIRDRIQEIIVPTEDIIEVSKKSKTKVTERSLYPGYVFIKVDLDTVLWHKIQ
SLPRVSRFIGENKKPTPLSEADIGHILEKMNNRAAPKPKIFFEQGEVVRVVEGPFANFTATVEEYDVEHRKLKLNVSIFG
RNTPIEILHSQVEKII
>Mature_176_residues
MMDWYAIQTYSGSEQSVKKAIENLANDHNIRDRIQEIIVPTEDIIEVSKKSKTKVTERSLYPGYVFIKVDLDTVLWHKIQ
SLPRVSRFIGENKKPTPLSEADIGHILEKMNNRAAPKPKIFFEQGEVVRVVEGPFANFTATVEEYDVEHRKLKLNVSIFG
RNTPIEILHSQVEKII

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=173, Percent_Identity=41.6184971098266, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20262; Mature: 20262

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDWYAIQTYSGSEQSVKKAIENLANDHNIRDRIQEIIVPTEDIIEVSKKSKTKVTERSL
CCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
YPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSEADIGHILEKMNNRAAPKPKI
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCE
FFEQGEVVRVVEGPFANFTATVEEYDVEHRKLKLNVSIFGRNTPIEILHSQVEKII
EECCCCEEEEECCCCCCCEEHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MMDWYAIQTYSGSEQSVKKAIENLANDHNIRDRIQEIIVPTEDIIEVSKKSKTKVTERSL
CCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
YPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSEADIGHILEKMNNRAAPKPKI
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCE
FFEQGEVVRVVEGPFANFTATVEEYDVEHRKLKLNVSIFGRNTPIEILHSQVEKII
EECCCCEEEEECCCCCCCEEHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]