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The map label for this gene is 108563540

Identifier: 108563540

GI number: 108563540

Start: 1174427

End: 1176352

Strand: Reverse

Name: 108563540

Synonym: HPAG1_1115

Alternate gene names: NA

Gene position: 1176352-1174427 (Counterclockwise)

Preceding gene: 108563542

Following gene: 108563539

Centisome position: 73.69

GC content: 40.24

Gene sequence:

>1926_bases
ATGAAAAAAACAAAAAAAACGATTCTGCTTTCTCTAACTCTTGCGTCATCATTGCTCCATGCTGAAGACAACGGCGTTTT
TTTAAGCGTGGGTTATCAAATCGGTGAAGCGGTTCAAAAAGTGAAAAACGCCGACAAGGTGCAAAAACTTTCAGACACTT
ATGAACAATTAAGCCGGCTTTTAACCAACGATAATGGCACAAACTCAAAGACAAGCGCGCAAGCGATCAACCAAGCGGTT
AATAATTTGAACGAACGCGCAAAAACTTTAGCCGGTGGGACAACCAATTCCCCTGCCTATCAAGCCACGCTTTTAGCGTT
GAGATCGGTTTTAGGGCTATGGAATAGCATGGGTTATGCGGTCATATGCGGAGGTTATACCAAAAGTCCAGGCGAAAACA
ATCAAAAAAATTTCCACTACACCGATGAGAATGGCAATGGCACTACAATCAATTGCGGTGGGAGCACAAATAGTGATGGC
ACTCATAGTTCTAGTGGCACAAATAAATTAAAAGCAGACAAAAATGTTTCTCTATCTATTGAGCAATATGAAAAAATCCA
TGAAGCCTATCAGATTCTTTCAAAAGCTTTAAAACAAGCTGGGCTTGCTCCTTTAAATAGCAAAGGGGAAAAATTAGAAG
CGTATGTAACCACATCAAAGTATCAACAAAATAGTCAAACTAAAACGACAACTTCTGTTATTGATACGACTAATGATGCG
CAAAATCTTTTGACTCAAGCGCAAACGATTGTCAATACCCTTAAAGATTATTGCCCCGTGTTGATAGCGAAATCTAGTAA
TGGAAGTAGTGGCACAGCTACTACAAACACCCCTTCATGGCAAACAGCCGGTGGGGGCAAAAATTCATGCGAGACTTTTG
GTGCGGAGTTTAGTGCCGCTTCAGACATGATTAATAATGCGCAAAAAATCGTTCAAGAAACCCAACAGCTTAATACTGCC
CCACTAAAAAGCATCGCGCAACCCCATAATCTCAACCTTAACACCCCTAGCAGTCTTACGGCTTTAGCTCAAAAAATGCT
CAAAAATGCGCAATCTCAAGCAGAAATTTTAAAACTAGCCAATCAAGTGGAGAGCGATTTTAACAAACTTTCTTCAGGCC
ATCTTAAAGACTACATAGGGAAATGCGATGCGAGCGCTATAAGCAGCGCGAATATGACAATGCACAATCAAAAGAACAAT
TGGGGGAACGGGTGTGCTGGCGTGGAAGAAACTCAGTCTTTGTTAAAAACAAGTGCCGCTGATTTTAACAACCAAACGCC
TCAAATCAATCAAGCGCAAAACCTAGCCAACACCCTTATTCAAGAACTTGGCAACAACCCTTTTAGGAATATGGGCATGA
TCGCTTCTTCAACCACGAATAACGGCGCCTTGAATGGCCTTGGGGTGCAAGTGGGTTATAAGCAATTTTTTGGAGAAAAG
AAAAGATGGGGGTTAAGGTATTATGGTTTCTTTGATTACAACCACGCCTACATCAAATCCAATTTCTTTAACTCGGCTTC
TGATGTATGGACTTATGGGGTGGGTAGCGATTTATTGTTTAATTTCATCAATGATAAAAACACCAATTTCTTAGGCAAGA
ATAACAAGATTTCTTTTGGGCTTTTTGGAGGCATCGCCTTAGCAGGGACTTCATGGCTTAATTCTCAATTCGTGAATTTA
AAAACCGTCAGCAATGTCTATAGCGCTAAAGTGAATACGGCTAACTTCCAATTTTTATTCAATTTAGGCTTGAGGACCAA
TCTCGCTAGACCTAAGAAAAAAGATAGTCATCATGCGGCTCAACATGGCATGGAATTGGGCGTGAAAATCCCTACCATTA
ACACGAATTACTATTCTTTTCTAGACACTAAACTAGAATATAGAAGGCTTTATAGCGTGTATCTCAATTATGTGTTTGCT
TATTAA

Upstream 100 bases:

>100_bases
TTTGAAATTCAATAAATTTATGTTAAAATTAAACACATTGTAAATAAATTCTCATTTTGATACATTTTTTGCAATAAAAC
ATTACTTTAAGGAACATCTT

Downstream 100 bases:

>100_bases
AAACCCTCTTTTTAAAAAAAGGGGGGGCTTTAAAAACCTCTAAAGCTAAAAATTTTCAAAAAACAATCATTAAACCCTAA
ACAAGAAATTTTAAGGTATA

Product: outer membrane protein HopQ

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HopB; Outer Membrane Protein HorF; Adhesin; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MKKTKKTILLSLTLASSLLHAEDNGVFLSVGYQIGEAVQKVKNADKVQKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAV
NNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVICGGYTKSPGENNQKNFHYTDENGNGTTINCGGSTNSDG
THSSSGTNKLKADKNVSLSIEQYEKIHEAYQILSKALKQAGLAPLNSKGEKLEAYVTTSKYQQNSQTKTTTSVIDTTNDA
QNLLTQAQTIVNTLKDYCPVLIAKSSNGSSGTATTNTPSWQTAGGGKNSCETFGAEFSAASDMINNAQKIVQETQQLNTA
PLKSIAQPHNLNLNTPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMHNQKNN
WGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRNMGMIASSTTNNGALNGLGVQVGYKQFFGEK
KRWGLRYYGFFDYNHAYIKSNFFNSASDVWTYGVGSDLLFNFINDKNTNFLGKNNKISFGLFGGIALAGTSWLNSQFVNL
KTVSNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSHHAAQHGMELGVKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFA
Y

Sequences:

>Translated_641_residues
MKKTKKTILLSLTLASSLLHAEDNGVFLSVGYQIGEAVQKVKNADKVQKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAV
NNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVICGGYTKSPGENNQKNFHYTDENGNGTTINCGGSTNSDG
THSSSGTNKLKADKNVSLSIEQYEKIHEAYQILSKALKQAGLAPLNSKGEKLEAYVTTSKYQQNSQTKTTTSVIDTTNDA
QNLLTQAQTIVNTLKDYCPVLIAKSSNGSSGTATTNTPSWQTAGGGKNSCETFGAEFSAASDMINNAQKIVQETQQLNTA
PLKSIAQPHNLNLNTPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMHNQKNN
WGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRNMGMIASSTTNNGALNGLGVQVGYKQFFGEK
KRWGLRYYGFFDYNHAYIKSNFFNSASDVWTYGVGSDLLFNFINDKNTNFLGKNNKISFGLFGGIALAGTSWLNSQFVNL
KTVSNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSHHAAQHGMELGVKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFA
Y
>Mature_641_residues
MKKTKKTILLSLTLASSLLHAEDNGVFLSVGYQIGEAVQKVKNADKVQKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAV
NNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVICGGYTKSPGENNQKNFHYTDENGNGTTINCGGSTNSDG
THSSSGTNKLKADKNVSLSIEQYEKIHEAYQILSKALKQAGLAPLNSKGEKLEAYVTTSKYQQNSQTKTTTSVIDTTNDA
QNLLTQAQTIVNTLKDYCPVLIAKSSNGSSGTATTNTPSWQTAGGGKNSCETFGAEFSAASDMINNAQKIVQETQQLNTA
PLKSIAQPHNLNLNTPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMHNQKNN
WGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRNMGMIASSTTNNGALNGLGVQVGYKQFFGEK
KRWGLRYYGFFDYNHAYIKSNFFNSASDVWTYGVGSDLLFNFINDKNTNFLGKNNKISFGLFGGIALAGTSWLNSQFVNL
KTVSNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSHHAAQHGMELGVKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFA
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69874; Mature: 69874

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTKKTILLSLTLASSLLHAEDNGVFLSVGYQIGEAVQKVKNADKVQKLSDTYEQLSRL
CCCCHHHEEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
VICGGYTKSPGENNQKNFHYTDENGNGTTINCGGSTNSDGTHSSSGTNKLKADKNVSLSI
EEECCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEH
EQYEKIHEAYQILSKALKQAGLAPLNSKGEKLEAYVTTSKYQQNSQTKTTTSVIDTTNDA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHCCCCHH
QNLLTQAQTIVNTLKDYCPVLIAKSSNGSSGTATTNTPSWQTAGGGKNSCETFGAEFSAA
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHH
SDMINNAQKIVQETQQLNTAPLKSIAQPHNLNLNTPSSLTALAQKMLKNAQSQAEILKLA
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NQVESDFNKLSSGHLKDYIGKCDASAISSANMTMHNQKNNWGNGCAGVEETQSLLKTSAA
HHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
DFNNQTPQINQAQNLANTLIQELGNNPFRNMGMIASSTTNNGALNGLGVQVGYKQFFGEK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCEEECCCCCCCCCCCEEEECHHHHCCCH
KRWGLRYYGFFDYNHAYIKSNFFNSASDVWTYGVGSDLLFNFINDKNTNFLGKNNKISFG
HCCCEEEEEEEECCCCEEECCCCCCCHHHEEECCCHHHHHHHHCCCCCCCCCCCCCEEEE
LFGGIALAGTSWLNSQFVNLKTVSNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSHHAA
ECCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH
QHGMELGVKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFAY
HCCCCCCEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTKKTILLSLTLASSLLHAEDNGVFLSVGYQIGEAVQKVKNADKVQKLSDTYEQLSRL
CCCCHHHEEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
VICGGYTKSPGENNQKNFHYTDENGNGTTINCGGSTNSDGTHSSSGTNKLKADKNVSLSI
EEECCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEH
EQYEKIHEAYQILSKALKQAGLAPLNSKGEKLEAYVTTSKYQQNSQTKTTTSVIDTTNDA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHCCCCHH
QNLLTQAQTIVNTLKDYCPVLIAKSSNGSSGTATTNTPSWQTAGGGKNSCETFGAEFSAA
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHH
SDMINNAQKIVQETQQLNTAPLKSIAQPHNLNLNTPSSLTALAQKMLKNAQSQAEILKLA
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NQVESDFNKLSSGHLKDYIGKCDASAISSANMTMHNQKNNWGNGCAGVEETQSLLKTSAA
HHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
DFNNQTPQINQAQNLANTLIQELGNNPFRNMGMIASSTTNNGALNGLGVQVGYKQFFGEK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCEEECCCCCCCCCCCEEEECHHHHCCCH
KRWGLRYYGFFDYNHAYIKSNFFNSASDVWTYGVGSDLLFNFINDKNTNFLGKNNKISFG
HCCCEEEEEEEECCCCEEECCCCCCCHHHEEECCCHHHHHHHHCCCCCCCCCCCCCEEEE
LFGGIALAGTSWLNSQFVNLKTVSNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSHHAA
ECCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH
QHGMELGVKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFAY
HCCCCCCEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA