Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is glnH [H]

Identifier: 108563536

GI number: 108563536

Start: 1169587

End: 1170420

Strand: Direct

Name: glnH [H]

Synonym: HPAG1_1111

Alternate gene names: 108563536

Gene position: 1169587-1170420 (Clockwise)

Preceding gene: 108563535

Following gene: 108563537

Centisome position: 73.27

GC content: 37.53

Gene sequence:

>834_bases
ATGAAAACGAACGGGCTTTTTAAGGTATGGGGGCTATTTTTAGTTTTAATCGCTTTAGTCTTTAATGCATGCTCTGATAG
CCATAAAGAAAAAAAGGACGCTTTAGAAGTTATTAAACAAAGAGGGGTTTTAAAAGTGGGGGTTTTTAGCGATAAGCCTC
CTTTTGGCTCTGTGGATTCTAAAGGGAAATATCAAGGCTATGATGTAGTCATTGCTAAACGCATGGCCCTTGATTTATTG
GGCGATGAAAATAAGATTGAGTTTATCCCTGTAGAAGCCTCAGCTAGGGTGGAATTTTTAAAAGCCAATAAAGTGGATAT
TATCATGGCTAATTTCACGCGCACCAAAGAAAGAGAAAAAGTCGTGGATTTCGCTAAGCCGTATATGAAAGTCGCTTTAG
GGGTGGTTTCTAAAGATGGGGTCATTAAAAATATAGAAGAGTTGAAAGATAAAGAGTTGATTGTGAATAAAGGCACGACA
GCGGATTTTTATTTCACTAAAAATTACCCCAATATCAAACTTTTGAAATTTGAGCAAAACACAGAGACTTTTTTAGCCCT
TTTAAACAATAAGGCTATCGCTCTAGCCCATGACAACACTTTATTGCTCGCTTGGACGAAACAGCACCCTGAGTTTAAAT
TAGGCATTACAAGCCTTGGCGATAAGGATGTGATCGCTCCAGCGATTAAAAAAGGCAACCCTAAGCTTTTAGAATGGCTG
AATAACGAAATTGATTCCCTCATTTCTAGCGACTTCTTAAAAGAAGCTTACAAGGAAACTTTAGAGCCTGTTTATGGCGA
TGAAATCAAACCGGAAGAAATTATTTTTGAATGA

Upstream 100 bases:

>100_bases
TCAAAGAGCGCAAAAATTTTTAGAAACTTTCCATTTTTTAGGGAGCTGTTAAATAAAGTTTGCTAAAAAGATGGTTTTAA
TTTCAAAAAAAGGTGTTTTT

Downstream 100 bases:

>100_bases
TTTCTTTAGGCTTTGATTTCTTGACAGAGCGCGTTTTTGTTGCTAAATTAGCAATTTTGTGATCTTTTTGTTTTTCATTT
TGAGATATATTTGTTTGACT

Product: glutamine ABC transporter, periplasmic glutamine-binding protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: GlnBP [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKTNGLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAKRMALDLL
GDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAKPYMKVALGVVSKDGVIKNIEELKDKELIVNKGTT
ADFYFTKNYPNIKLLKFEQNTETFLALLNNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL
NNEIDSLISSDFLKEAYKETLEPVYGDEIKPEEIIFE

Sequences:

>Translated_277_residues
MKTNGLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAKRMALDLL
GDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAKPYMKVALGVVSKDGVIKNIEELKDKELIVNKGTT
ADFYFTKNYPNIKLLKFEQNTETFLALLNNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL
NNEIDSLISSDFLKEAYKETLEPVYGDEIKPEEIIFE
>Mature_277_residues
MKTNGLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVVIAKRMALDLL
GDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAKPYMKVALGVVSKDGVIKNIEELKDKELIVNKGTT
ADFYFTKNYPNIKLLKFEQNTETFLALLNNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL
NNEIDSLISSDFLKEAYKETLEPVYGDEIKPEEIIFE

Specific function: Involved in glutamine-transport system. Interacts with the glutamine-transport system glnPQ [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787085, Length=208, Percent_Identity=24.5192307692308, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787088, Length=199, Percent_Identity=25.6281407035176, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788228, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787031, Length=205, Percent_Identity=29.7560975609756, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786876, Length=178, Percent_Identity=25.8426966292135, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 31260; Mature: 31260

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNGLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
KGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREK
CCCCCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHH
VVDFAKPYMKVALGVVSKDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKLLKFEQN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEECCC
TETFLALLNNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL
HHHHHHHHCCCEEEEEECCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHH
NNEIDSLISSDFLKEAYKETLEPVYGDEIKPEEIIFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKTNGLFKVWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
KGKYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREK
CCCCCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHH
VVDFAKPYMKVALGVVSKDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKLLKFEQN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEECCC
TETFLALLNNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL
HHHHHHHHCCCEEEEEECCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHH
NNEIDSLISSDFLKEAYKETLEPVYGDEIKPEEIIFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1856180 [H]