Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 108563501

GI number: 108563501

Start: 1130175

End: 1131047

Strand: Reverse

Name: parB [H]

Synonym: HPAG1_1076

Alternate gene names: 108563501

Gene position: 1131047-1130175 (Counterclockwise)

Preceding gene: 108563502

Following gene: 108563500

Centisome position: 70.85

GC content: 38.03

Gene sequence:

>873_bases
ATGGCAAAAAATAAAGTGTTGGGTAGGGGTTTAGCGGATATTTTCCCTGAAATCAATGAAGTGTATGAGCAAGGGTTGTA
TGAAAGAGCGAATCGGGTTGTGGAGCTTGGTATTGATGAGGTGATGCCCAATCCTTACCAGCCCAGGAAGGTCTTTAGCG
AAGATTCTTTAGAAGAATTAGCGCAATCCATTAAAGAACATGGTTTGTTGCAGCCGGTTTTAGTGGTGAGTGAGAACGGG
CGTTACCATTTGATCGCTGGTGAAAGGCGTTTAAGAGCGAGCAAATTGGCTAAAATGCCTACGATTAAAGCGATTGTTGT
GGATATTGAGCAAGAAAAAATGCGTGAAGTCGCTTTGATTGAAAATATCCAGCGAGAAGATTTAAACCCTTTAGAGTTAG
CTAGATCTTATAAAGAATTGCTTGAAAGCTATCAAATGACTCAAGAAGAGCTGTCTAAAATCGTTAAAAAATCCCGAGCC
CATGTGGCTAATATCATGCGTTTATTGACGCTCTCTTCTAAGGTTCAAAACGCTCTTTTAGAAGAAAAAATCACTTCAGG
GCATGCAAAAGTCTTGGTGGGTTTGGATGAAAAAAAACAAGAATTGATTTTAAATTCCATTATAGGGCAAAAACTCAGCG
TGCGCCAGACAGAAGATTTAGCACGTGATTTTAAAACAAACGCAAATTGTGAAAATAAAAAACATGGTTTCAAGGAAACC
CAAACGCTCATCGCTGAAGATGAATTAGAACGCTTGAATCAAAGTTTGTGGGATCATTACAAGCTTAAAGCGGCTTTGAA
AGGGAATAAAATCATTTTACGATGTTATGAAAATTCTCTTTTAGAGGCTTTTATGAAAAAAATGATGTCTTAA

Upstream 100 bases:

>100_bases
ATCGCCTAGTTTTGGTAAGCCCATCTTGCTCTATGATATTAAATCTAATGGCAGTATCGCTTATCAAAAATTAGCTCAAA
GCATTCTTCAAGGGTAGCAT

Downstream 100 bases:

>100_bases
CGCTTGAATATTCTCAAATTTTAAGCGATTTTTTGTTAAGATAGAGTTAATGTTTTTATAACAAATGCGAGTTTCAAATA
TTTTGTAGGATTTTGGGAAA

Product: plasmid replication-partition related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKVFSEDSLEELAQSIKEHGLLQPVLVVSENG
RYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRA
HVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDFKTNANCENKKHGFKET
QTLIAEDELERLNQSLWDHYKLKAALKGNKIILRCYENSLLEAFMKKMMS

Sequences:

>Translated_290_residues
MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKVFSEDSLEELAQSIKEHGLLQPVLVVSENG
RYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRA
HVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDFKTNANCENKKHGFKET
QTLIAEDELERLNQSLWDHYKLKAALKGNKIILRCYENSLLEAFMKKMMS
>Mature_289_residues
AKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKVFSEDSLEELAQSIKEHGLLQPVLVVSENGR
YHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAH
VANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDFKTNANCENKKHGFKETQ
TLIAEDELERLNQSLWDHYKLKAALKGNKIILRCYENSLLEAFMKKMMS

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33283; Mature: 33152

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKVFSEDSLEEL
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCHHHHH
AQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALI
HHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCHHHHEEECCHHHHHHHHHH
ENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDFKTNANCENKKHGFKET
HHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHCCHHHH
QTLIAEDELERLNQSLWDHYKLKAALKGNKIILRCYENSLLEAFMKKMMS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKVFSEDSLEEL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCHHHHH
AQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALI
HHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCHHHHEEECCHHHHHHHHHH
ENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKITSGHAKVLVGLDEKKQELILNSIIGQKLSVRQTEDLARDFKTNANCENKKHGFKET
HHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHCCHHHH
QTLIAEDELERLNQSLWDHYKLKAALKGNKIILRCYENSLLEAFMKKMMS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]