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The map label for this gene is trl [H]

Identifier: 108563354

GI number: 108563354

Start: 971936

End: 972235

Strand: Direct

Name: trl [H]

Synonym: HPAG1_0929

Alternate gene names: 108563354

Gene position: 971936-972235 (Clockwise)

Preceding gene: 108563341

Following gene: 108563355

Centisome position: 60.88

GC content: 45.67

Gene sequence:

>300_bases
TTGCGTTTGAAGTTAGCTAGCGTATGCTTGGGCGTTTTGATGAGTGGTTGTGCGTCTTCTTCGCCAACTGGTGCTCTTAT
CACTATGGTAACGATGCCAGTTTCTGGGAATGATGCACAATACTCCAAAGAAGGGCGTGCGAGTTGTTGGAGTGTTTTTA
GTCTTGTAGCTGCCGGTAATTGTTCGGTAGAAAAAGCGGCTAAAAGCGGCGGTGTTACCAAGATTAAAATGGTGAGCCGT
GAGACAAACAACTTTTTAGGTATTGTTGGCAAATACACCACGATCGTTCAAGGCGACTAG

Upstream 100 bases:

>100_bases
ATAGCTCAGTGGTAGAGCACGACCTTGCCAAGGTCGGGGCCGCGGGTTCGATCCCCGTTTCCCGCTCCATAACTTAATTA
GTATTTAAGAGGATTTAAGA

Downstream 100 bases:

>100_bases
TTTTAATATTTAGAGAGCGTAGTTGAATCATCTTTCGTTCCACTCTAGGCTTAAAGCCTGAGTTGCCCAGGTGGTGGAAT
TGGTAGACACAAGGGACTTA

Product: protein tRNA-associated locus protein

Products: NA

Alternate protein names: tRNA-associated locus protein [H]

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MRLKLASVCLGVLMSGCASSSPTGALITMVTMPVSGNDAQYSKEGRASCWSVFSLVAAGNCSVEKAAKSGGVTKIKMVSR
ETNNFLGIVGKYTTIVQGD

Sequences:

>Translated_99_residues
MRLKLASVCLGVLMSGCASSSPTGALITMVTMPVSGNDAQYSKEGRASCWSVFSLVAAGNCSVEKAAKSGGVTKIKMVSR
ETNNFLGIVGKYTTIVQGD
>Mature_99_residues
MRLKLASVCLGVLMSGCASSSPTGALITMVTMPVSGNDAQYSKEGRASCWSVFSLVAAGNCSVEKAAKSGGVTKIKMVSR
ETNNFLGIVGKYTTIVQGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10226; Mature: 10226

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKLASVCLGVLMSGCASSSPTGALITMVTMPVSGNDAQYSKEGRASCWSVFSLVAAGN
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
CSVEKAAKSGGVTKIKMVSRETNNFLGIVGKYTTIVQGD
CCHHHHHHCCCCEEEEEECCCCCCEEEEEECEEEEEECC
>Mature Secondary Structure
MRLKLASVCLGVLMSGCASSSPTGALITMVTMPVSGNDAQYSKEGRASCWSVFSLVAAGN
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
CSVEKAAKSGGVTKIKMVSRETNNFLGIVGKYTTIVQGD
CCHHHHHHCCCCEEEEEECCCCCCEEEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10411255; 9252185 [H]