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The map label for this gene is queD [H]

Identifier: 108563338

GI number: 108563338

Start: 960041

End: 960646

Strand: Direct

Name: queD [H]

Synonym: HPAG1_0913

Alternate gene names: 108563338

Gene position: 960041-960646 (Clockwise)

Preceding gene: 108563337

Following gene: 108563339

Centisome position: 60.14

GC content: 40.26

Gene sequence:

>606_bases
GTGATGGTTATCAGGCGGTTGTATAAATTTTGCGCTAGCCATGTGGTGCGCAATTGCTCTTCTGTAAAATGCGCTCAAAA
TATCCATGGGCATAATTACGAAGTGGAAGTCTTTATTGAAACCAACCGCTTAGACAGCGCGAACATGGCGTTAGATTTTG
GGTTGATGCAACAAGAGATGCAAGTTTTCATTGAGTCGTTTGATCATGCCCATCATTTTTGGGACAAAGAAAGCGATGAG
TTCCAGCGTTTTATAGAAGATCATTGCGTGCGTTACGTGAAATGCTCGTTTAATTTGAGCGCAGAGGGTTACGCCCTCAT
GTTTTTATACTACCTGACAAAGATTTTACAAAAAAGCGTTTTTTCTAATGATGAAGGGGAGTTAAAAGTCTCTAGCGTGC
GCGTGCATGAGACTAAAAACGGCTACGCGGAGAGCTCTTTAAAAGATTTAGAAAACCCTCATTTTAAATCTTTAGTGCAT
CCAAATTGCGTCTCTTTCTCGCAAGGCATTCAAAATTTGTGGCATGATAAGGATTTTTTCAATAAAATCATCAGCGATGA
AAAACAATGCTTTTTCCACGCTAAGCCCTTACACCAAATCCCATGA

Upstream 100 bases:

>100_bases
TCTGATTAAAAGCACGATCAAGCGCATTGATTTTAACCGCCCTGAACGCTACTACTATAATTTAAGACTGCCCCTTTATC
AGCCATGTTATAGGCAATGA

Downstream 100 bases:

>100_bases
AACTCCCGGTCGTTGAGAGCTTTTTTTCCTTACAAGGTGAAGGAAAAAACATAGGCAAACCCAGTCTTTTTTTACGCTTA
GGGGGGTGTAACCTTTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: CPH4 synthase; Queuosine biosynthesis protein queD [H]

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MMVIRRLYKFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEMQVFIESFDHAHHFWDKESDE
FQRFIEDHCVRYVKCSFNLSAEGYALMFLYYLTKILQKSVFSNDEGELKVSSVRVHETKNGYAESSLKDLENPHFKSLVH
PNCVSFSQGIQNLWHDKDFFNKIISDEKQCFFHAKPLHQIP

Sequences:

>Translated_201_residues
MMVIRRLYKFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEMQVFIESFDHAHHFWDKESDE
FQRFIEDHCVRYVKCSFNLSAEGYALMFLYYLTKILQKSVFSNDEGELKVSSVRVHETKNGYAESSLKDLENPHFKSLVH
PNCVSFSQGIQNLWHDKDFFNKIISDEKQCFFHAKPLHQIP
>Mature_201_residues
MMVIRRLYKFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEMQVFIESFDHAHHFWDKESDE
FQRFIEDHCVRYVKCSFNLSAEGYALMFLYYLTKILQKSVFSNDEGELKVSSVRVHETKNGYAESSLKDLENPHFKSLVH
PNCVSFSQGIQNLWHDKDFFNKIISDEKQCFFHAKPLHQIP

Specific function: Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde [H]

COG id: COG0720

COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTPS family. QueD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007115 [H]

Pfam domain/function: PF01242 PTPS [H]

EC number: NA

Molecular weight: Translated: 23625; Mature: 23625

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVIRRLYKFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEM
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
QVFIESFDHAHHFWDKESDEFQRFIEDHCVRYVKCSFNLSAEGYALMFLYYLTKILQKSV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH
FSNDEGELKVSSVRVHETKNGYAESSLKDLENPHFKSLVHPNCVSFSQGIQNLWHDKDFF
HCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCHHHH
NKIISDEKQCFFHAKPLHQIP
HHHHCCCHHHEEECCCCCCCC
>Mature Secondary Structure
MMVIRRLYKFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEM
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
QVFIESFDHAHHFWDKESDEFQRFIEDHCVRYVKCSFNLSAEGYALMFLYYLTKILQKSV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH
FSNDEGELKVSSVRVHETKNGYAESSLKDLENPHFKSLVHPNCVSFSQGIQNLWHDKDFF
HCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCHHHH
NKIISDEKQCFFHAKPLHQIP
HHHHCCCHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]