Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is folE [H]
Identifier: 108563334
GI number: 108563334
Start: 957115
End: 957657
Strand: Direct
Name: folE [H]
Synonym: HPAG1_0909
Alternate gene names: 108563334
Gene position: 957115-957657 (Clockwise)
Preceding gene: 108563333
Following gene: 108563335
Centisome position: 59.96
GC content: 37.94
Gene sequence:
>543_bases ATGGAAAATTTTTTCAACCAATTTTTTGAAAATATCGGCGAAGATAAGAATAGAGAAGGTCTAAAAGAGACGCCTAAAAG GGTTCAAGAATTATGGAAATTCTTGTATAAAGGCTATAAAGAAGACCCTAGAGTGGCTTTAAAAAGCGCGTATTTTCAAG GCGTTTGCGATGAAATGATAGTGGCTCAAAACATTGAATTTTACTCCACTTGCGAACACCATTTGCTCCCTTTTTTGGGG AATATCAGTTTAGGATACATTCCTAAAGAAAAGATTGTAGGCATTAGCGCGATCGCCAAACTCATTGAAATTTATAGCAA ACGCCTGCAAATCCAAGAAAGGCTGACCACTCAAATTACAGAAACCTTTGATGAAATCATAGAGCCAAGGGGCGTGATTG TGGTTTGTGAAGCCAAGCATTTGTGCATGAGCATGCAGGGGGTGCAAAAGCAAAATGCGATCATTAAAACAAGTGTGTTA AGAGGCCTCTTTAAAAAAGACCCTAAAACCAGAGCTGAATTTATGCAACTCTTAAAATCTTAG
Upstream 100 bases:
>100_bases CTCCACCCGATCGGCGGCTTATCTTTTTAACGCTGAAATGTTTAGCACCCACCCTAGCATTAAAAATCGTATCCAATCTT TATCAAGGCGCGTGATTTAA
Downstream 100 bases:
>100_bases GTTATAATTCTGTGCATGAATAACCCTAATTTATCCTTTTATTATAATGAGTGCGAGCGTTTTGAAAGCTTTTTAAAAAA CCATCATTTACACCTTGAAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFLG NISLGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQITETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVL RGLFKKDPKTRAEFMQLLKS
Sequences:
>Translated_180_residues MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFLG NISLGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQITETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVL RGLFKKDPKTRAEFMQLLKS >Mature_180_residues MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFLG NISLGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQITETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVL RGLFKKDPKTRAEFMQLLKS
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=176, Percent_Identity=44.8863636363636, Blast_Score=181, Evalue=3e-46, Organism=Homo sapiens, GI4503949, Length=176, Percent_Identity=44.8863636363636, Blast_Score=181, Evalue=3e-46, Organism=Homo sapiens, GI66932970, Length=134, Percent_Identity=42.5373134328358, Blast_Score=131, Evalue=4e-31, Organism=Homo sapiens, GI66932972, Length=134, Percent_Identity=42.5373134328358, Blast_Score=130, Evalue=5e-31, Organism=Escherichia coli, GI1788476, Length=168, Percent_Identity=31.547619047619, Blast_Score=103, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=45.5056179775281, Blast_Score=184, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321706, Length=168, Percent_Identity=46.4285714285714, Blast_Score=164, Evalue=9e-42, Organism=Drosophila melanogaster, GI24656782, Length=180, Percent_Identity=44.4444444444444, Blast_Score=166, Evalue=9e-42, Organism=Drosophila melanogaster, GI24656796, Length=180, Percent_Identity=44.4444444444444, Blast_Score=165, Evalue=1e-41, Organism=Drosophila melanogaster, GI24656791, Length=180, Percent_Identity=44.4444444444444, Blast_Score=165, Evalue=1e-41,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 20900; Mature: 20900
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMI CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VAQNIEFYSTCEHHLLPFLGNISLGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQIT HHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC >Mature Secondary Structure MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMI CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VAQNIEFYSTCEHHLLPFLGNISLGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQIT HHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA