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The map label for this gene is 108563250

Identifier: 108563250

GI number: 108563250

Start: 859527

End: 860510

Strand: Direct

Name: 108563250

Synonym: HPAG1_0825

Alternate gene names: NA

Gene position: 859527-860510 (Clockwise)

Preceding gene: 108563249

Following gene: 108563251

Centisome position: 53.84

GC content: 43.19

Gene sequence:

>984_bases
ATGCTAGACAACAAAACGATTTTAATCACCGGTGGCACTGGGAGTTTTGGCAAACGCTTTGCGCGTAAAGTTTTAGACAC
CACCAACGCTAAAAAAATCATCGTTTATAGCCGAGATGAATTAAAACAAAGCGAAATGGCCATGGAATTTAATGATCCTA
GGATGCGTTTTTTTATCGGCGATGTGAGGGATTTAGAACGCTTGAATTACGCTTTAGAGGGCGTGGATATTTGTATCCAT
GCCGCCGCGCTCAAGCATGTGCCTATCGCTGAATACAACCCCCTAGAATGCATTAAAACTAACATTATGGGAGCGAGCAA
TGTGATTAACGCATGCCTAAAAAATGAAGTGAGCCAGGTCATCGCTCTAAGCACCGATAAAGCCGCTAACCCCATTAACC
TCTACGGCGCGACAAAATTGTGCAGCGATAAGCTCTTTGTGAGCGCGAATAACTTTAAAGGCTCTTCTCAAACGCAATTT
AGCGTGGTGCGTTATGGTAATGTGGTGGGGAGTCGTGGGAGCGTGGTGCCGTTTTTTAAAAAATTAGTCCAAAACAAAGC
GAGTGAAATCCCTATCACCGATATTCGCATGACACGATTTTGGATCACCTTAGATGAGGGGGTTTCTTTTGTGCTTAAAA
GCTTGAAAAGAATGCATGGGGGTGAAATTTTTGTGCCTAAAATCCCTAGCATGAAAATGACCGATCTCGCTAAAGCCCTA
GCCCCCAATATTCCTACTAAAATCATCGGCATTCGCCCGGGCGAAAAACTCCATGAAGTGATGATCCCTAAAGATGAAAG
CCATTTAGCCCTAGAATTTGAAGACTTTTTTATTATTCAGCCCACCATAAGCTTCCAAACGCCTAAAGATTACACGCTCA
CCAAACTCCACGAAAAAGGCCACAAAGTCGCTCCCGATTTTGAATACAGCAGCCATACTAACAGCAAATGGCTAGAGCCT
GATGATTTATTGAAATTACTATGA

Upstream 100 bases:

>100_bases
GTTTCACTTTTAAAAGCAACCGCTCCAGTTTGTATCAATCCCCAAACATTGGGCAATTGAGAATCTTTAGCGCCTCTTTA
GGCTATCGCTGGTAAAAAAC

Downstream 100 bases:

>100_bases
ATTTTTTAGAAGATTTGTTTTACCCCTTAAGGTTATTAGAAAACAAGCGCGTTTTATTGCTTGTTAGCGGCTCTATTGCA
GCGTATAAATCCCTAGAATT

Product: UDP-GlcNAc C6 dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLDNKTILITGGTGSFGKRFARKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH
AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEVSQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQF
SVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKAL
APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGHKVAPDFEYSSHTNSKWLEP
DDLLKLL

Sequences:

>Translated_327_residues
MLDNKTILITGGTGSFGKRFARKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH
AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEVSQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQF
SVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKAL
APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGHKVAPDFEYSSHTNSKWLEP
DDLLKLL
>Mature_327_residues
MLDNKTILITGGTGSFGKRFARKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH
AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEVSQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQF
SVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKAL
APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGHKVAPDFEYSSHTNSKWLEP
DDLLKLL

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 36683; Mature: 36683

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNKTILITGGTGSFGKRFARKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHEECCCCEEEEEEC
DVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEVSQV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
IALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFK
EEECCCCCCCCEEECCCHHHHCCCEEEEECCCCCCCCCEEEEEEECCEECCCCCCHHHHH
KLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKAL
HHHHCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKG
CCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCEEEEECEEECCCCCCCHHHHHHHCC
HKVAPDFEYSSHTNSKWLEPDDLLKLL
CCCCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MLDNKTILITGGTGSFGKRFARKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHEECCCCEEEEEEC
DVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEVSQV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
IALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFK
EEECCCCCCCCEEECCCHHHHCCCEEEEECCCCCCCCCEEEEEEECCEECCCCCCHHHHH
KLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKAL
HHHHCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
APNIPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKG
CCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCEEEEECEEECCCCCCCHHHHHHHCC
HKVAPDFEYSSHTNSKWLEPDDLLKLL
CCCCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]