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The map label for this gene is ftsY [H]

Identifier: 108563173

GI number: 108563173

Start: 784134

End: 785015

Strand: Direct

Name: ftsY [H]

Synonym: HPAG1_0748

Alternate gene names: 108563173

Gene position: 784134-785015 (Clockwise)

Preceding gene: 108563172

Following gene: 108563179

Centisome position: 49.12

GC content: 41.38

Gene sequence:

>882_bases
ATGTTTAATTTTTTCAAAAAAATTGTCAATAAGATTAAGGGTGAAGAGATTAAAGAAAAAAAGCGCCAAAGCGTTCCTAA
AGAGGAATTAGAAGAAATTTTGATTGGCTTTGACATCCAATACGACTTGATAGAGAGCTTGTTAAAGCATTTAGGCGATT
TAGTTACGCCCAAGCAATTAGAAGTCGCTTTGTTGCGTTTTGTGCGTGGGGAAAGCTATTATGATAAAACCCGCCTAAAA
ACCATCACCACAAAGCCCTTAGTGCATTTAATCGTGGGGGTTAATGGGGCGGGAAAAACCACAACGATCGCCAAACTCGC
CAAGCTTTCTTTAAAGCAGCATAAAAAAACGCTTTTAGGAGCCGGCGATACCTTTAGAGCGGCCGCAGTCAAACAGCTGC
AATTATGGGGCGAAAAGCTTAACATTCAAGTCATTAGCGCTAAAGAAGGGAGCGATCCAAGCTCTCTAGCTTATAACACC
ATAGAAAGCGCGATCGCTAAAAATATAGATGAAGTTTTTATAGACACCGCCGGGAGATTACACAACCAGACCAACCTTAA
AAACGAGCTTTCTAAAATCGCGCGCACCTGCTCTAAAGTTTTAAAAGACGCCCCCTTTTATAAATTCCTTATTTTAGACG
GCACGCAAGGGAGTTCTGGTCTCACGCAAGCCAAAATTTTCCATGAGACTTTGGCGTTAGATGGCGTGATTATGACTAAG
CTTGATGGCACTTCTAAAGGCGGGGCGATTTTAAGCGTGCTGTATGAGTTGAAATTACCCATTCTTTATTTAGGAATGGG
CGAAAAAGAAGACGATTTGATCGCTTTTGATGAAGAACGCTTTATAGCAGACTTGGTTGATGCGGTGTTTGTGGGACAAT
AA

Upstream 100 bases:

>100_bases
TGCTCTTATACCACAAACACCAATTGATTAAAATATATCAAGGGATCGTGCCAATAGAAATGCTCCAATTTGATATTTCC
CACTTAAAGGATTAAAAACC

Downstream 100 bases:

>100_bases
ATTAAAAATTATTTCCTAAGAATGACCCTGAAGCTCTTATCCATATGGTTTGCTTCTTGCAAAGCGTTACAAACCTCTGC
GTTTTTGGCATAAAACTCCT

Product: signal recognition particle receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MFNFFKKIVNKIKGEEIKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLVTPKQLEVALLRFVRGESYYDKTRLK
TITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKTLLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNT
IESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIADLVDAVFVGQ

Sequences:

>Translated_293_residues
MFNFFKKIVNKIKGEEIKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLVTPKQLEVALLRFVRGESYYDKTRLK
TITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKTLLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNT
IESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIADLVDAVFVGQ
>Mature_293_residues
MFNFFKKIVNKIKGEEIKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLVTPKQLEVALLRFVRGESYYDKTRLK
TITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKTLLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNT
IESAIAKNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIADLVDAVFVGQ

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=266, Percent_Identity=31.203007518797, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI4507215, Length=258, Percent_Identity=31.3953488372093, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI23308697, Length=314, Percent_Identity=26.4331210191083, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI295424842, Length=314, Percent_Identity=26.4331210191083, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1789874, Length=200, Percent_Identity=49.5, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1788963, Length=230, Percent_Identity=33.0434782608696, Blast_Score=125, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=199, Percent_Identity=31.1557788944724, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193206261, Length=207, Percent_Identity=32.3671497584541, Blast_Score=95, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6325345, Length=197, Percent_Identity=32.994923857868, Blast_Score=105, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6320498, Length=258, Percent_Identity=31.0077519379845, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17647949, Length=207, Percent_Identity=32.3671497584541, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24641198, Length=217, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 32511; Mature: 32511

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFFKKIVNKIKGEEIKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLVTPKQL
CCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
EVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKTLLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
AGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRL
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEE
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIADLVDAVFVGQ
CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNFFKKIVNKIKGEEIKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLVTPKQL
CCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
EVALLRFVRGESYYDKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKTLLG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
AGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNTIESAIAKNIDEVFIDTAGRL
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTK
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEE
LDGTSKGGAILSVLYELKLPILYLGMGEKEDDLIAFDEERFIADLVDAVFVGQ
CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]