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The map label for this gene is 108562823

Identifier: 108562823

GI number: 108562823

Start: 406370

End: 406639

Strand: Direct

Name: 108562823

Synonym: HPAG1_0398

Alternate gene names: NA

Gene position: 406370-406639 (Clockwise)

Preceding gene: 108562822

Following gene: 108562824

Centisome position: 25.46

GC content: 35.93

Gene sequence:

>270_bases
ATGATGGGGTTCTTATTGAGAAAGACTGAAATTAAAATCCGCATGTGTGTGGCGTGCAGAATGCGCCAACCTCAAAAGGA
TTTGTTGCGTTTGAAAAGCTTTGAAAATCAAATCATGGAGTTTGATGGCAAAGGCCGTAGTTTTTATGTGTGTGGAAATT
GTTTGAAAAATGGAGAAAAAAAGTTGTTGAAAGCGGTTTCAAAAATAAAGAATGCCCCAAAAGATGTTAAAAATATCATT
ACTTGGATTAAGGAGAGAAGCATAGCATGA

Upstream 100 bases:

>100_bases
TCGTTTTTTAACATGTGTTATGAAGAAGACGCCCCTAAATTAAAGCAGGTTTTGAGCAAGAAATTCCCTAAATTTAGGGT
AGCGGTTTTAGATTTTGATA

Downstream 100 bases:

>100_bases
GTGGTATGGTTGATTTAAAAGAATTTTTAGCCGAGCTTGGTAAGACCCAAAAAGAGCTTAAAAATGTGATCGAGCAAGCC
AAAGACATTGGTTTAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MMGFLLRKTEIKIRMCVACRMRQPQKDLLRLKSFENQIMEFDGKGRSFYVCGNCLKNGEKKLLKAVSKIKNAPKDVKNII
TWIKERSIA

Sequences:

>Translated_89_residues
MMGFLLRKTEIKIRMCVACRMRQPQKDLLRLKSFENQIMEFDGKGRSFYVCGNCLKNGEKKLLKAVSKIKNAPKDVKNII
TWIKERSIA
>Mature_89_residues
MMGFLLRKTEIKIRMCVACRMRQPQKDLLRLKSFENQIMEFDGKGRSFYVCGNCLKNGEKKLLKAVSKIKNAPKDVKNII
TWIKERSIA

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10380; Mature: 10380

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGFLLRKTEIKIRMCVACRMRQPQKDLLRLKSFENQIMEFDGKGRSFYVCGNCLKNGEK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCHHH
KLLKAVSKIKNAPKDVKNIITWIKERSIA
HHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMGFLLRKTEIKIRMCVACRMRQPQKDLLRLKSFENQIMEFDGKGRSFYVCGNCLKNGEK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCHHH
KLLKAVSKIKNAPKDVKNIITWIKERSIA
HHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA