Click here to switch to the map view.

The map label for this gene is 108562792

Identifier: 108562792

GI number: 108562792

Start: 380302

End: 380871

Strand: Direct

Name: 108562792

Synonym: HPAG1_0367

Alternate gene names: NA

Gene position: 380302-380871 (Clockwise)

Preceding gene: 108562791

Following gene: 108562793

Centisome position: 23.82

GC content: 38.42

Gene sequence:

>570_bases
ATGAAAAAGATTGCATTTTTTATTTTTGTCATTTTGTTTTCGGTAGGGATTTATTTAATTTGGCATGTTTTATTGGAAAA
AGCCCTAGAATTGAAATTAGCAACATCAGCTAATGATTTGCTTTTAAAATTGTTGTCAATTCTTGGCGTTTTTTCCATGT
TAGTGCTTTTTCAAGGCGTTATTTCTTCGTATAAGAAGCGCCAACTCAAACGCGCTTTACAAAAAATAGACGCCATGAAC
GGCTTTGAATTTGAAGAATATTCCAAAATCTTTTTCACTTCAAAGGGTTTTGAAGTGAGCATCACGCAAAAAAGCGGCGA
TTATGGAGCGGATTTGATTATAGAAAAAGACGGCATCAAATGGGCGGTTCAAGCCAAACGCTACTCGCATAAAGTTTCGC
CCAAAGCCATTCAAGAGGTGGTCTCTTCTAAAGCTTACTACGCTTGCGAAAAAGCTTGCGTGATCACCAACAGCTATTTC
ACGCAAGCCGCTCAAAAACTGGCTCAAGCTAACGAAGTGCTCTTGATTGACAGAGATGAATGGGTCAGGTTTTTGGGTGG
GAAAAACTAA

Upstream 100 bases:

>100_bases
TAACGCTTTGATCAAAGCCCTTAATAAGGCTTACTATTCTCTTATGGAGGGTTTAGAAAAGCGTTTGAACGCTATAGAAA
ATGCAGAGTGGCTTTAAGGC

Downstream 100 bases:

>100_bases
TCCAAATAGGATAATTTATATAATGCTTTTATTTTTATGATTTCTTATTTATTTCCTATTAAATTTTTTCGTAATCGCAT
GCGTTATAATATGAAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Restriction Endonuclease Family Protein; Type II Restriction Endonuclease Family Protein; Endonuclease; Mrr-Like Endonuclease; Restriction Endonuclease Family; Prophage; 5-Methylcytosine-Specific Restriction MRR

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKIAFFIFVILFSVGIYLIWHVLLEKALELKLATSANDLLLKLLSILGVFSMLVLFQGVISSYKKRQLKRALQKIDAMN
GFEFEEYSKIFFTSKGFEVSITQKSGDYGADLIIEKDGIKWAVQAKRYSHKVSPKAIQEVVSSKAYYACEKACVITNSYF
TQAAQKLAQANEVLLIDRDEWVRFLGGKN

Sequences:

>Translated_189_residues
MKKIAFFIFVILFSVGIYLIWHVLLEKALELKLATSANDLLLKLLSILGVFSMLVLFQGVISSYKKRQLKRALQKIDAMN
GFEFEEYSKIFFTSKGFEVSITQKSGDYGADLIIEKDGIKWAVQAKRYSHKVSPKAIQEVVSSKAYYACEKACVITNSYF
TQAAQKLAQANEVLLIDRDEWVRFLGGKN
>Mature_189_residues
MKKIAFFIFVILFSVGIYLIWHVLLEKALELKLATSANDLLLKLLSILGVFSMLVLFQGVISSYKKRQLKRALQKIDAMN
GFEFEEYSKIFFTSKGFEVSITQKSGDYGADLIIEKDGIKWAVQAKRYSHKVSPKAIQEVVSSKAYYACEKACVITNSYF
TQAAQKLAQANEVLLIDRDEWVRFLGGKN

Specific function: Unknown

COG id: COG1787

COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21467; Mature: 21467

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAFFIFVILFSVGIYLIWHVLLEKALELKLATSANDLLLKLLSILGVFSMLVLFQGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ISSYKKRQLKRALQKIDAMNGFEFEEYSKIFFTSKGFEVSITQKSGDYGADLIIEKDGIK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEEEECCCCCCCEEEEECCCCE
WAVQAKRYSHKVSPKAIQEVVSSKAYYACEKACVITNSYFTQAAQKLAQANEVLLIDRDE
EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH
WVRFLGGKN
HHHHCCCCC
>Mature Secondary Structure
MKKIAFFIFVILFSVGIYLIWHVLLEKALELKLATSANDLLLKLLSILGVFSMLVLFQGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ISSYKKRQLKRALQKIDAMNGFEFEEYSKIFFTSKGFEVSITQKSGDYGADLIIEKDGIK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCEEEEEECCCCCCCEEEEECCCCE
WAVQAKRYSHKVSPKAIQEVVSSKAYYACEKACVITNSYFTQAAQKLAQANEVLLIDRDE
EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH
WVRFLGGKN
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA