Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562732

Identifier: 108562732

GI number: 108562732

Start: 320649

End: 321203

Strand: Direct

Name: 108562732

Synonym: HPAG1_0307

Alternate gene names: NA

Gene position: 320649-321203 (Clockwise)

Preceding gene: 108562731

Following gene: 108562733

Centisome position: 20.09

GC content: 38.38

Gene sequence:

>555_bases
ATGAAAAAAATGGTTTTGGTATCGGTTTTACTAGCAGGGTTTTTGCAAGCGGTGAATTTGGATTTATCTTCGGCTAAGCT
AACATGGACAGCCTTTAAATCTAAGGCTAAAACACCAGTAAATGGGAGTTTTGAAAGCATCACCTATAAATTGGGTAAAT
CTCAAGATAGTTTAAAAACCCTTTTAGAGGGAGCGAGCGCGAGTATGGATAGCTTGAAAGTCAATTTGGGCGATGACACT
AAAAACAAAAATGTTAAAGAAGCTTTTTTCGCTCTTTTTAAAAATACTAACATCAAAGTAACTTTTAGAAATGTGATAGA
AGGCGATCATGCAGGTTCTCTTACGGCTTATGTGAGGATGAATGAAAAGCTGGTAAAAGTGCCTATGCAATACACGATTG
CTGAGGATAAGCTCGTGGTTAAAGGGGTCTTGGATCTGTTGAGTTTTGGCTTGAAAAACGAATTAGCGAGCTTGGCTAAA
CGATGCGAGAGTTTTCATGAGGGCTTGACTTGGTCGCAAGTGGAAATCCAATTTGAAAGCATGATTAAGGGATAA

Upstream 100 bases:

>100_bases
AGTGCAAATGATTATCAAAATGAATCGTTTTAGTTGTAAGCGTGCTTGTTTACACTAAAATAATAAGCGTTATTGATAAG
ACCACATTAAAGGATAATGA

Downstream 100 bases:

>100_bases
TTTAAAATCATGGAGTTGTTGCACAGCATTAATGATTTTAATGAAGCTAAGCAGGTGATCGCTGGGGGGGTCAATTCACC
TGTGAGGGCGTTTAAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKMVLVSVLLAGFLQAVNLDLSSAKLTWTAFKSKAKTPVNGSFESITYKLGKSQDSLKTLLEGASASMDSLKVNLGDDT
KNKNVKEAFFALFKNTNIKVTFRNVIEGDHAGSLTAYVRMNEKLVKVPMQYTIAEDKLVVKGVLDLLSFGLKNELASLAK
RCESFHEGLTWSQVEIQFESMIKG

Sequences:

>Translated_184_residues
MKKMVLVSVLLAGFLQAVNLDLSSAKLTWTAFKSKAKTPVNGSFESITYKLGKSQDSLKTLLEGASASMDSLKVNLGDDT
KNKNVKEAFFALFKNTNIKVTFRNVIEGDHAGSLTAYVRMNEKLVKVPMQYTIAEDKLVVKGVLDLLSFGLKNELASLAK
RCESFHEGLTWSQVEIQFESMIKG
>Mature_184_residues
MKKMVLVSVLLAGFLQAVNLDLSSAKLTWTAFKSKAKTPVNGSFESITYKLGKSQDSLKTLLEGASASMDSLKVNLGDDT
KNKNVKEAFFALFKNTNIKVTFRNVIEGDHAGSLTAYVRMNEKLVKVPMQYTIAEDKLVVKGVLDLLSFGLKNELASLAK
RCESFHEGLTWSQVEIQFESMIKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20318; Mature: 20318

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMVLVSVLLAGFLQAVNLDLSSAKLTWTAFKSKAKTPVNGSFESITYKLGKSQDSLKT
CCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCHHHHHEECCCCHHHHHH
LLEGASASMDSLKVNLGDDTKNKNVKEAFFALFKNTNIKVTFRNVIEGDHAGSLTAYVRM
HHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEE
NEKLVKVPMQYTIAEDKLVVKGVLDLLSFGLKNELASLAKRCESFHEGLTWSQVEIQFES
CCHHEECCHHEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHEEEHHH
MIKG
HCCC
>Mature Secondary Structure
MKKMVLVSVLLAGFLQAVNLDLSSAKLTWTAFKSKAKTPVNGSFESITYKLGKSQDSLKT
CCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCHHHHHEECCCCHHHHHH
LLEGASASMDSLKVNLGDDTKNKNVKEAFFALFKNTNIKVTFRNVIEGDHAGSLTAYVRM
HHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEE
NEKLVKVPMQYTIAEDKLVVKGVLDLLSFGLKNELASLAKRCESFHEGLTWSQVEIQFES
CCHHEECCHHEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHEEEHHH
MIKG
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA