Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
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Accession | NC_008027 |
Length | 5,888,780 |
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The map label for this gene is sbcC
Identifier: 104780877
GI number:
Start: 1792132
End: 1795776
Strand: Reverse
Name: sbcC
Synonym: PSEEN1721
Alternate gene names: NA
Gene position: NA
Preceding gene: 104780878
Following gene: 104780876
Centisome position: NA
GC content: NA
Gene sequence:
>3645_bases ATGAAGATTCTCGCCATTCGCCTGAAGAACCTGGCCTCGCTGGCTGGCCCGGTCGAAATCGATTTCACCGCCGAACCCCT GGCCAGTGCCGGTCTGTTCGCCATCACCGGCCCCACCGGCGCTGGCAAGAGCACCCTGCTTGATGCCCTATGCCTGGCCC TGTTCGGTACCGTGCCACGGCTCAATGACATCGCCCGGGAAGCCAAGGTACCCGATGCCGACGGTGAAATTCCCACTTCC GACCCGCGCAACCTGCTGCGTCGCGGCGCCGGCAGCGGCTTCGCCGAGGTGGACTTCGTTGGCATCGATGGCTGCCGCTA CCGCGCACGCTGGGAAGCCAACCGGGCCCGCGAGAAAGCCAACGGCAAGCTGCAGAACAGCCGTCAGAGCCTTTATGACC TGGACAGCGAACAACTGCTGGGCAGCGGCAAGAACGAGTACAAGCAGCTGGTCGAGGCACGCCTGGGGCTGAACTTCGAG CAGTTCACCCGCGCGGTGATGCTGGCCCAGAGCGAGTTCGGCGCGTTCCTCAAAGCAGATGACAAGGAGCGCAGCGAGCT ACTGGAAAAGCTCACCAACACCGCGATCTACACCCGCCTCGGCCAACGCGCGTTCAGCAAGACCCGGGAAACCGGCGAAG TGCATAACGACCTGAAAAAGCAGGCCGAACACCTGCTGCCAATGGAAAGCGAAGCCCGCGCGGCCCTCGACCAGCAACTG GAACAGGCCCTGCAGCAGTTCAAGGCCGACCAGGCGCGCCAGCGTCAACTGGAACAGCAACGCACCTGGCTTGATGAGCA GCGCCGTCTGCAGGCCCAGCACACTGAGGCTGGCAAAGCACTGCAAGGCGCCGAGCATGATTGGCAGCAACTGGCCGAGC AGCGCCTGGACCTGCAACGCCTGGAACGCCTGGCCCCGCAACGCCACCAGTTCCACCGCCAGCAGACCCTGGCCGCGCAA TTGAACCCCCTGCTGACGGAGATCGATCAGCAGCAGCACCAGCAAAACGCACTGCAAGCCCGCACCGGCGAGCAGGAGCA GGCACTGGAAGCTGCGCGCCAGGCCTTGGCCCAGCACCAGGCACAGCACAGCGAAAACGCCCCGCGCCTGCGCCAGGCCT TCACCGCCCAGAGCGACCTGGCCCGCCTCGACAAGGAACTGGTCGAGCAACGCGAGGCCTGCCAGCACGCCGAGCAGGCC GTCGGTGAAAGCCAGCAACAGCTGCAACTGCTTGAAGACAATCAGCAACGCAGCCAGCAGCAACTGGCGCAGATCGACGC CGCTCTGGTCGAGAGCGAGCACCTGGGCAGCCTGGCCGACGCCTGGCAGGCGTATCTGCCACAGCTCAAGCAAGTGATGC TGGTCGGCGGGCGCCTGGCCAAAGGCCGTGAAGAACTGCCCGGCCTGCAAGCGCTGGCCAGCCAGGCCAATGCCCAGTTG CAAACCCAACGCGACACGTTCGAGCTGCTGTTCCGTGAAGCCGGGGCCGAGCCCCAGGCGCTGGCCGAGCAGATCGACTT GCTGGGCAACATGCTCCAGGAAAATCGCAAGCAACAACGCACCGTCGAGGAAGTCGCGCGCCTGCATGGTCGCGAGCTGG AACTGCGCCAGGGTATCGCCGCGCTGCGTGAACGTCAGCAACAGGCCATGCAGCAACGCCAGCAGCTGATCACCGAAGGC ACCGCCGCCAAGGCCGAGCTGGAAGCGGGCGAACAGGCCCTGACCCTCACCCGCCAGTTGCTGGAACGCCAGCGCCTGGC CCGCAACACCAGCGTCGAGGAACTGCGCGCCCAGTTGCGTGATGGCGAACCCTGCCCGGTCTGCGGCAGCGCCGAGCACC CGTTCCATCAACCCGAAGCCCTGCTGCACAGCCTTGGCCGCCATGACCAGGCCGAAGAGGACGCCGCGCACAAGCGTGTA GAACAACTCGGCGCCACGCTGGTGGAACTGCGCACCCAGCTGGGCGTGGTCAACGCTCAGCTCAAGGACTATCAGCAGCA ACAGGTGCAATTGGGCGAGCAGCTGCAACCTGTGGTCGAGCAGGTCCAGGACCACGTGCTATGGCCCGCCCTCGCCCCGC AGGACGACAAGGCCCGCAGTGCCTGGCTCGATGGCCAGTTGCGCCGCCTGGACGAAGAGATCAACCGCGACGAGAAACGC CAGGGTGCCCTGCTCGCCCTGCAGAAGGATGCGGCGCGCCTCAACCAGCAACTGCAGGCTGCCAACGACGCCCAGCAGCA AGCACAGCGCCACCTCGAGCAGCAACACCAGGCCCTGGCCACTGACGAGCAGCAGCTTGAGCAAAGCCTGATCGACCTCG CCAGCGTGCTGCCTCAGGACATCCTCCAGGCCCTGCGCGACGACCCGGCCAATGCCTTCCTCGGCCTGGACCAGCAGATC GCCCTGCGCCGACAACAGCTCGACCAGCGCAAGGACGAACAGGAAGAACAGCAGGCCCGTCAGGGCCAGCTGGACAAGCT GCGCGATCAACAGCAGAACCGCCAGCACAACCTGCAGCAGCTGCAACACAAGCTCACCGCCCTGGATGAACAACACCAGC TGGCACGTACCACGCTGGGCGAACTGCTGGGCGAGCAACCCACTGCCGAAGCCTGGCAAAAGCACATGGACACGCAGCTG GAGCAGGCCCGCGCCACCGAAGCGGACACCGCACAGCACCTCCAGGCATTGCGCACCCAGAACCTGGAACTAACCGGTGA ATTGAAGGCCAACCACCAGCGCCAGCAAGCGCTGGAGCAGGAGCACCAGCACCTGCAGGGTGAAATCGCCCAATGGCGCG GCGAGCACCCCGAGCTGGACGACGCTGGCCTCGATCGCCTGCTGGCCATCGACGACGCTCAACTGGGCGAACTGCGTCAA CGCCTGCAAGGCGCGGAAAAAGCCATCGAGCAAGGCCGCGTGCTGTTGCAGGAGCGCGAACAACGTCTGCAGCAGCACGC CACCCAGGCGCAAGCCGACTTGCCGGTTGAAACGCTGGAGCAGGCGCTCGCCGAGCTCCAACAGCAGCTGGCGGCCCAGG AACAACACTGCGCCGAGTTGCGTGCCCGGCAGGCTGACGACCAACGCCGACAACAGGCCCACCAGGCGCTGGCCGAACAG ATCGACCAGGCCTATCGCCAGTGGCAACGCTGGGCACGCCTGAACGCATTGATCGGCTCGGCCTCGGGCGATGTGTTCCG CAAGATCGCCCAGGGCTACAACCTCGACCTGCTGCTGCACCACGCCAACAGCCAGCTGCGCCAGTTGGCGAAACGTTATC GCCTCAAGCGCGGCGGAAGCGCCCTGGGCCTGCTGGTGCTGGACACCGAGATGGGCGACGAGCTGCGTTCGGTGCACTCG CTGTCCGGCGGCGAAACCTTCCTGGTCTCGCTGGCCCTGGCCCTGGGCCTGGCGTCGATGGCCTCGAGTACCCTGCGCAT CGAGTCGCTGTTCATCGACGAAGGCTTCGGCAGCCTCGACCCTGAGTCGCTGCAACTGGCCATGGACGCCCTTGACGGCC TGCAGGCCCAGGGGCGCAAGGTGGCGGTGATTTCCCACGTGCAGGAGATGCACGAGCGTATCCCGGTGCAGATCCAGGTG CGCCGCCAGGGCAACGGCCTGAGCGACGTGGAGGTATGCGGGTGA
Upstream 100 bases:
>100_bases GCCGCGCCTGGGAGCAAGCCTACGGCAGTGCCGCCGACGAGCAGGCCCTGGCCGACTTCGCCGAACTGCTGCAAGACGTC CTGCATGAGGAGGAGCAGCC
Downstream 100 bases:
>100_bases TTCTCTACTCATTCCGCCGCTGCCCCTGGGCCATGCGCGCGCGCCTGGCCCTGCGCTATGCCGGATGCGAAGTTCGGGTG CAGGAAGTGAAGATGAAAGA
Product: exonuclease SbcC
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1214_residues MKILAIRLKNLASLAGPVEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPRLNDIAREAKVPDADGEIPTS DPRNLLRRGAGSGFAEVDFVGIDGCRYRARWEANRAREKANGKLQNSRQSLYDLDSEQLLGSGKNEYKQLVEARLGLNFE QFTRAVMLAQSEFGAFLKADDKERSELLEKLTNTAIYTRLGQRAFSKTRETGEVHNDLKKQAEHLLPMESEARAALDQQL EQALQQFKADQARQRQLEQQRTWLDEQRRLQAQHTEAGKALQGAEHDWQQLAEQRLDLQRLERLAPQRHQFHRQQTLAAQ LNPLLTEIDQQQHQQNALQARTGEQEQALEAARQALAQHQAQHSENAPRLRQAFTAQSDLARLDKELVEQREACQHAEQA VGESQQQLQLLEDNQQRSQQQLAQIDAALVESEHLGSLADAWQAYLPQLKQVMLVGGRLAKGREELPGLQALASQANAQL QTQRDTFELLFREAGAEPQALAEQIDLLGNMLQENRKQQRTVEEVARLHGRELELRQGIAALRERQQQAMQQRQQLITEG TAAKAELEAGEQALTLTRQLLERQRLARNTSVEELRAQLRDGEPCPVCGSAEHPFHQPEALLHSLGRHDQAEEDAAHKRV EQLGATLVELRTQLGVVNAQLKDYQQQQVQLGEQLQPVVEQVQDHVLWPALAPQDDKARSAWLDGQLRRLDEEINRDEKR QGALLALQKDAARLNQQLQAANDAQQQAQRHLEQQHQALATDEQQLEQSLIDLASVLPQDILQALRDDPANAFLGLDQQI ALRRQQLDQRKDEQEEQQARQGQLDKLRDQQQNRQHNLQQLQHKLTALDEQHQLARTTLGELLGEQPTAEAWQKHMDTQL EQARATEADTAQHLQALRTQNLELTGELKANHQRQQALEQEHQHLQGEIAQWRGEHPELDDAGLDRLLAIDDAQLGELRQ RLQGAEKAIEQGRVLLQEREQRLQQHATQAQADLPVETLEQALAELQQQLAAQEQHCAELRARQADDQRRQQAHQALAEQ IDQAYRQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLHHANSQLRQLAKRYRLKRGGSALGLLVLDTEMGDELRSVHS LSGGETFLVSLALALGLASMASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV RRQGNGLSDVEVCG
Sequences:
NA
Specific function: NA
COG id: COG0419
COG function: function code L; ATPase involved in DNA repair
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA