Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488199

Identifier: 103488199

GI number: 103488199

Start: 2869355

End: 2869720

Strand: Reverse

Name: 103488199

Synonym: Sala_2722

Alternate gene names: NA

Gene position: 2869720-2869355 (Counterclockwise)

Preceding gene: 103488200

Following gene: 103488198

Centisome position: 85.79

GC content: 58.74

Gene sequence:

>366_bases
ATGACCAAGCGAAATCAGGCAAATGAGGAAAGGCGGCTGTTCGCTTTGAACCACGTGTTCGGCTCCGCCCCGTGGCTGAA
GCCATCGGAGAAAACGCGGCACAAGGTGAAGGTGTTCAAATCGGGCAATTCGCTGGCGGTGCGGATCCCGGCGGGCACAC
GGCTGGTGGCTGGAACCGAAATGGATCTGATTGTCGAAGACGGGCAATTTCTCTCATACGAACCCGCCAACCAACCGAAG
CGCAAGTTCAACATCGCCAAAGTGGCGGGGTCGGCCACCGACCTGAATCTGATCGCGCCGGAGGACCGGCTATTCGACGA
CCGTGCCTTGTTGACGGGGAAGAATAGCGGGAACGACGGTACGTGA

Upstream 100 bases:

>100_bases
CTCGCCAAGGATCGCCACCGGTACCCCGATTTGCTGTGGCAGCCGCCGACTTGATCTTGGGCGATGATGTATATACATTA
TGTATATACAGGAGCGAGCG

Downstream 100 bases:

>100_bases
AATATCTGCTGGATAGCAACGCCATCATTGCGCTGGTGATGAATCTGGATGCACGGCTCGTATCGCGGGCGGGGGAATGC
GACGAGGGCGATCTCGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTEMDLIVEDGQFLSYEPANQPK
RKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDGT

Sequences:

>Translated_121_residues
MTKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTEMDLIVEDGQFLSYEPANQPK
RKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDGT
>Mature_120_residues
TKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTEMDLIVEDGQFLSYEPANQPKR
KFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13366; Mature: 13235

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTE
CCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCC
MDLIVEDGQFLSYEPANQPKRKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDG
EEEEEECCCEEEECCCCCCCHHEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCC
T
C
>Mature Secondary Structure 
TKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTE
CCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCC
MDLIVEDGQFLSYEPANQPKRKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDG
EEEEEECCCEEEECCCCCCCHHEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA