| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103488199
Identifier: 103488199
GI number: 103488199
Start: 2869355
End: 2869720
Strand: Reverse
Name: 103488199
Synonym: Sala_2722
Alternate gene names: NA
Gene position: 2869720-2869355 (Counterclockwise)
Preceding gene: 103488200
Following gene: 103488198
Centisome position: 85.79
GC content: 58.74
Gene sequence:
>366_bases ATGACCAAGCGAAATCAGGCAAATGAGGAAAGGCGGCTGTTCGCTTTGAACCACGTGTTCGGCTCCGCCCCGTGGCTGAA GCCATCGGAGAAAACGCGGCACAAGGTGAAGGTGTTCAAATCGGGCAATTCGCTGGCGGTGCGGATCCCGGCGGGCACAC GGCTGGTGGCTGGAACCGAAATGGATCTGATTGTCGAAGACGGGCAATTTCTCTCATACGAACCCGCCAACCAACCGAAG CGCAAGTTCAACATCGCCAAAGTGGCGGGGTCGGCCACCGACCTGAATCTGATCGCGCCGGAGGACCGGCTATTCGACGA CCGTGCCTTGTTGACGGGGAAGAATAGCGGGAACGACGGTACGTGA
Upstream 100 bases:
>100_bases CTCGCCAAGGATCGCCACCGGTACCCCGATTTGCTGTGGCAGCCGCCGACTTGATCTTGGGCGATGATGTATATACATTA TGTATATACAGGAGCGAGCG
Downstream 100 bases:
>100_bases AATATCTGCTGGATAGCAACGCCATCATTGCGCTGGTGATGAATCTGGATGCACGGCTCGTATCGCGGGCGGGGGAATGC GACGAGGGCGATCTCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTEMDLIVEDGQFLSYEPANQPK RKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDGT
Sequences:
>Translated_121_residues MTKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTEMDLIVEDGQFLSYEPANQPK RKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDGT >Mature_120_residues TKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTEMDLIVEDGQFLSYEPANQPKR KFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13366; Mature: 13235
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTE CCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCC MDLIVEDGQFLSYEPANQPKRKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDG EEEEEECCCEEEECCCCCCCHHEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCC T C >Mature Secondary Structure TKRNQANEERRLFALNHVFGSAPWLKPSEKTRHKVKVFKSGNSLAVRIPAGTRLVAGTE CCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEECCC MDLIVEDGQFLSYEPANQPKRKFNIAKVAGSATDLNLIAPEDRLFDDRALLTGKNSGNDG EEEEEECCCEEEECCCCCCCHHEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA