| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488179
Identifier: 103488179
GI number: 103488179
Start: 2845062
End: 2845256
Strand: Reverse
Name: 103488179
Synonym: Sala_2702
Alternate gene names: NA
Gene position: 2845256-2845062 (Counterclockwise)
Preceding gene: 103488180
Following gene: 103488178
Centisome position: 85.06
GC content: 64.62
Gene sequence:
>195_bases ATGATGCTCAACTGCCACGACGCGACATTCCTGATGTCGCAGCGGCGCGAGCGCGATCTCCGCTTTTCGGAGCGCATGAA GCTGCGCCTGCACGCGGGGCTGTGCCGCGACTGCGCCAATTTCGAACGGCAAATCCCGCTCCTGGGCGAAGCCGCGAAGC GCCTCGCGGCGAAAGAGGACGGTCATGGCGTGTAA
Upstream 100 bases:
>100_bases AGCTTGGTCTCACCAGCGGGAACATCCATGTCATCCTGCACCGCGCGCGGCTCGCGCTGCGCGCCTGTCTCCAGCATCAC TGGTTCGCGGAGGCGGTGCG
Downstream 100 bases:
>100_bases GCTTTTGCCGTCTCGCGCGACCAATCTCGCTAAAGGCCTCCCGCCGGAAGGAAGTTCATGAACAAACGTCTCATCCTGCT GCTGCTTGTCGCGCTGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MMLNCHDATFLMSQRRERDLRFSERMKLRLHAGLCRDCANFERQIPLLGEAAKRLAAKEDGHGV
Sequences:
>Translated_64_residues MMLNCHDATFLMSQRRERDLRFSERMKLRLHAGLCRDCANFERQIPLLGEAAKRLAAKEDGHGV >Mature_64_residues MMLNCHDATFLMSQRRERDLRFSERMKLRLHAGLCRDCANFERQIPLLGEAAKRLAAKEDGHGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7415; Mature: 7415
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNCHDATFLMSQRRERDLRFSERMKLRLHAGLCRDCANFERQIPLLGEAAKRLAAKED CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GHGV CCCC >Mature Secondary Structure MMLNCHDATFLMSQRRERDLRFSERMKLRLHAGLCRDCANFERQIPLLGEAAKRLAAKED CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GHGV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA