| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488087
Identifier: 103488087
GI number: 103488087
Start: 2751295
End: 2751543
Strand: Reverse
Name: 103488087
Synonym: Sala_2609
Alternate gene names: NA
Gene position: 2751543-2751295 (Counterclockwise)
Preceding gene: 103488088
Following gene: 103488086
Centisome position: 82.25
GC content: 67.87
Gene sequence:
>249_bases ATGAGCCGCACGGCGAAAATCGCGGCGGCCGGCACGCTCGGCGGGATGCTCATGGCGCTGACGATCGGCATCACGCTTCA CGAGGACCGCCACGTCGAGACGGTGATCGTCCCGCCGGACGAGAGCGCTGCCGATCCACAGACTCGCGATCTTCGCCGTT GCCGGACGCTCACCATGCCCGACAGCAGCTGCGAGGCCGCCTGGGAAGAAAAGCGCCGCCGTTTCTATCGCAGGGAGGAC CGGCCGTGA
Upstream 100 bases:
>100_bases GCCGCCCAAGGCCGCGCCCAGGCGCTCGAATCCGCGCGAAACGCTGCGATCGAGGCCGAAGCGCGCGAACGGTTTCGGCG TTTCCGGGGCAAGAACTGAC
Downstream 100 bases:
>100_bases ACGACACCGGCGTAATCGACACCTTCCTCGGCGTCTTCACCGGCTATATCGACAGCGGGTTCGGGCTGCTTGGCGGAGAA GTCGGCTTCCTGTCCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSRTAKIAAAGTLGGMLMALTIGITLHEDRHVETVIVPPDESAADPQTRDLRRCRTLTMPDSSCEAAWEEKRRRFYRRED RP
Sequences:
>Translated_82_residues MSRTAKIAAAGTLGGMLMALTIGITLHEDRHVETVIVPPDESAADPQTRDLRRCRTLTMPDSSCEAAWEEKRRRFYRRED RP >Mature_81_residues SRTAKIAAAGTLGGMLMALTIGITLHEDRHVETVIVPPDESAADPQTRDLRRCRTLTMPDSSCEAAWEEKRRRFYRREDR P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9313; Mature: 9182
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTAKIAAAGTLGGMLMALTIGITLHEDRHVETVIVPPDESAADPQTRDLRRCRTLTMP CCCCCCEEEHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC DSSCEAAWEEKRRRFYRREDRP CCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRTAKIAAAGTLGGMLMALTIGITLHEDRHVETVIVPPDESAADPQTRDLRRCRTLTMP CCCCCEEEHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC DSSCEAAWEEKRRRFYRREDRP CCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA