| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487981
Identifier: 103487981
GI number: 103487981
Start: 2638892
End: 2639146
Strand: Reverse
Name: 103487981
Synonym: Sala_2502
Alternate gene names: NA
Gene position: 2639146-2638892 (Counterclockwise)
Preceding gene: 103487982
Following gene: 103487980
Centisome position: 78.89
GC content: 63.14
Gene sequence:
>255_bases TTGTCAATCTGCCTGACTATCGCAGCATTCATGACAAAGCGGCCCACCATAGCGGAGCGAGTGGCAGGACTGGTCCGCAG GATGGACGGGACGCCGCTTTGCGACGAATGTATCGCCGACCGGCTCGACCTTTCGTCGATCGCACAGGCGAGTGTCGTTA CCAGTTCGGCGAGCGGGACCGGAGGCTTCGAGCGGTTGAGAGGCCCCTGCGGCCTCTGCGGAGAGCCAGGGCCGGTCATC CGCTACAACGGTTGA
Upstream 100 bases:
>100_bases AAATCTTGTTCGCAGCGCTTTTGGTTCGAGTGTCTGCTTCTCCAGATTTCGAACCAAAAGTTGCCTGACCGTAATCGGCC AATTTCGCAGGGGCTTCCGT
Downstream 100 bases:
>100_bases ACGTCCGGAATCCGGCCGGCCAAATCGAGCGCGGCTGAATTGGGCGTGCTCTGGCGCCGGCAGACGGCGCCAGGGGCCGC GCGTTGTTCTGGGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSICLTIAAFMTKRPTIAERVAGLVRRMDGTPLCDECIADRLDLSSIAQASVVTSSASGTGGFERLRGPCGLCGEPGPVI RYNG
Sequences:
>Translated_84_residues MSICLTIAAFMTKRPTIAERVAGLVRRMDGTPLCDECIADRLDLSSIAQASVVTSSASGTGGFERLRGPCGLCGEPGPVI RYNG >Mature_83_residues SICLTIAAFMTKRPTIAERVAGLVRRMDGTPLCDECIADRLDLSSIAQASVVTSSASGTGGFERLRGPCGLCGEPGPVIR YNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8789; Mature: 8658
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSICLTIAAFMTKRPTIAERVAGLVRRMDGTPLCDECIADRLDLSSIAQASVVTSSASGT CCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCC GGFERLRGPCGLCGEPGPVIRYNG CCHHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure SICLTIAAFMTKRPTIAERVAGLVRRMDGTPLCDECIADRLDLSSIAQASVVTSSASGT CHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCC GGFERLRGPCGLCGEPGPVIRYNG CCHHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA