Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103487758
Identifier: 103487758
GI number: 103487758
Start: 2399025
End: 2400407
Strand: Direct
Name: 103487758
Synonym: Sala_2277
Alternate gene names: NA
Gene position: 2399025-2400407 (Clockwise)
Preceding gene: 103487757
Following gene: 103487759
Centisome position: 71.72
GC content: 67.1
Gene sequence:
>1383_bases ATGCGCGAAATGAGCACGCGCACCGCTTCGGACCGCCACGATCCCGTCATCGAACATCGCGACCAGCTTGCGGCCCCCAT GGCCGACGGCGAAAAGCCCAAGGAGCGCTGGCGCATCGGCACCGAGCATGAAAAGTTCGTCTACCGTGTGAGCGATCACC GCGCGCCCTCCTATGACGAACCCGGCGGCATCCACGACCTCCTGATGGCGCTCACCCGCTTCGGCTGGGAGCCGGTGATC GAGGGCGGCAAGGTCATCGCGCTGGCGGGCAGCGACGGCACCGTCAGCCTCGAACCCGCGGGGCAACTCGAACTCTCGGG CGCCCCGCTCGAAAATCTGCACCAGACCTGCGCCGAAACCGGCCGCCATCTGAAGCAGGTGAAGGAAGTCGGCGCCGAAC TCGGGCTCGGCTTCCTTGGGCTCGGCATGTGGCCCGACAAGAGGCGCGACGAGCTGCCGATCATGCCCAAGGGGCGCTAC CGGATCATGCTCGATCATATGCCGCGCGTCGGCAGCCTCGGCCTCGACATGATGCTGCGCACCTGCACAATCCAGACCAA CCTCGACTATGCGAGCGAAGCCGACATGGTGCAGAAGTTCCGCGTGTCGCTCGCGCTCCAGCCGCTCGCGACCGCGCTCT TCGCCTCGTCGCCCTTCACCGAGGGTCGGCCCAACGGCTATCTGTCGTACCGCAGCCATATCTGGACCGACACCGACCCC GCGCGCACCGGAATGCTGCCCTTCGTCTTCGAGGATGGTTTCGGCTACGACCGCTATGTCGACTATATGCTCGACGTGCC GATGTATTTCGTCTTCCGCGACGGCCAATATATCGACGCCGCCGGCCAGAGCTTCCGCGACTTTCTGAAGGGCGAGCTGC CGGCGCTCCCCGGCGAACTGCCGCGCCTGTCCGACTGGACCGACCATCTCTCGACCGCCTTTCCCGAAGTGCGGCTCAAA AGCTTCCTCGAAATGCGCGGCGCCGACGGCGGCCCGTGGAACCGCATCTGCGCGCTTCCGGCGCTGTGGGTCGGCCTCCT CTACGACCAGGACGCACTCGACGCCGCCTGGGATCTCGTCAAGGGGTGGAGCATCGCCGAGCAACAGGCGCTGCGCGACG CAGTGCCGCGCGAAGGGCTCGACGCGCCCGCGCCCGGCGGCGGCACGGTGGGGCAATTGGCGCACCGCGTGCTCGACATC GCCGCCGCGGGCCTCGCCGCGCGCGGCGAGGTCAATTCGATGGGCGACAATGAAGTCGGTTTCCTCGAACCGCTGCGCCG CATCGCGAAAAGCGGCAGATCCCCCGCGCACGACCTGCTCGACCGCTACGAGGATGCGTGGGGCCACGACCTCTCCCGAA TCTACGACGAGCTGAGCTTCTGA
Upstream 100 bases:
>100_bases CACAGCCACACTCGCCCCCGGCGGCGCGATGGCGATCGCTTTCACCGTCACGATCGACTGATCGCACGGCCCCGATTGCA TTCTATACCGGATAGTCTAA
Downstream 100 bases:
>100_bases CGATCGGGCGGTCGATGGGTATCCGGCGACGCGCCCGTCGCAGCGCTTCCCCGAAGCGCGACCGTCCTTCTGCCGACCGC TTCCATCACGACCGCGCCAG
Product: glutamate--cysteine ligase
Products: ADP; phosphate; gamma-L-glutamyl-L-cysteine
Alternate protein names: Glutamate/Cysteine Ligase; Gamma-Glutamylcysteine Synthetase; Glutamate/Cysteine Ligase Family Protein; Glutamate-Cysteine Ligase GshA; Glutamylcysteine Synthetase; Glutamate-Cysteine Ligase Family 2 Protein; Glutamate-Cysteine Ligase Protein; Glutathione Synthetase; Glutamate-Cysteine Ligase Gsha; Glutamate-Cysteine Ligase Protein; Glutamate-Cysteine Ligase Family Protein; Glutamate Cystein Ligase Protein; Glutamate-Cysteine Ligase GSHA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MREMSTRTASDRHDPVIEHRDQLAAPMADGEKPKERWRIGTEHEKFVYRVSDHRAPSYDEPGGIHDLLMALTRFGWEPVI EGGKVIALAGSDGTVSLEPAGQLELSGAPLENLHQTCAETGRHLKQVKEVGAELGLGFLGLGMWPDKRRDELPIMPKGRY RIMLDHMPRVGSLGLDMMLRTCTIQTNLDYASEADMVQKFRVSLALQPLATALFASSPFTEGRPNGYLSYRSHIWTDTDP ARTGMLPFVFEDGFGYDRYVDYMLDVPMYFVFRDGQYIDAAGQSFRDFLKGELPALPGELPRLSDWTDHLSTAFPEVRLK SFLEMRGADGGPWNRICALPALWVGLLYDQDALDAAWDLVKGWSIAEQQALRDAVPREGLDAPAPGGGTVGQLAHRVLDI AAAGLAARGEVNSMGDNEVGFLEPLRRIAKSGRSPAHDLLDRYEDAWGHDLSRIYDELSF
Sequences:
>Translated_460_residues MREMSTRTASDRHDPVIEHRDQLAAPMADGEKPKERWRIGTEHEKFVYRVSDHRAPSYDEPGGIHDLLMALTRFGWEPVI EGGKVIALAGSDGTVSLEPAGQLELSGAPLENLHQTCAETGRHLKQVKEVGAELGLGFLGLGMWPDKRRDELPIMPKGRY RIMLDHMPRVGSLGLDMMLRTCTIQTNLDYASEADMVQKFRVSLALQPLATALFASSPFTEGRPNGYLSYRSHIWTDTDP ARTGMLPFVFEDGFGYDRYVDYMLDVPMYFVFRDGQYIDAAGQSFRDFLKGELPALPGELPRLSDWTDHLSTAFPEVRLK SFLEMRGADGGPWNRICALPALWVGLLYDQDALDAAWDLVKGWSIAEQQALRDAVPREGLDAPAPGGGTVGQLAHRVLDI AAAGLAARGEVNSMGDNEVGFLEPLRRIAKSGRSPAHDLLDRYEDAWGHDLSRIYDELSF >Mature_460_residues MREMSTRTASDRHDPVIEHRDQLAAPMADGEKPKERWRIGTEHEKFVYRVSDHRAPSYDEPGGIHDLLMALTRFGWEPVI EGGKVIALAGSDGTVSLEPAGQLELSGAPLENLHQTCAETGRHLKQVKEVGAELGLGFLGLGMWPDKRRDELPIMPKGRY RIMLDHMPRVGSLGLDMMLRTCTIQTNLDYASEADMVQKFRVSLALQPLATALFASSPFTEGRPNGYLSYRSHIWTDTDP ARTGMLPFVFEDGFGYDRYVDYMLDVPMYFVFRDGQYIDAAGQSFRDFLKGELPALPGELPRLSDWTDHLSTAFPEVRLK SFLEMRGADGGPWNRICALPALWVGLLYDQDALDAAWDLVKGWSIAEQQALRDAVPREGLDAPAPGGGTVGQLAHRVLDI AAAGLAARGEVNSMGDNEVGFLEPLRRIAKSGRSPAHDLLDRYEDAWGHDLSRIYDELSF
Specific function: Unknown
COG id: COG3572
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.2.2
Molecular weight: Translated: 51185; Mature: 51185
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREMSTRTASDRHDPVIEHRDQLAAPMADGEKPKERWRIGTEHEKFVYRVSDHRAPSYDE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHEEEEECCCCCCCCCC PGGIHDLLMALTRFGWEPVIEGGKVIALAGSDGTVSLEPAGQLELSGAPLENLHQTCAET CCCHHHHHHHHHHCCCHHHCCCCEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHH GRHLKQVKEVGAELGLGFLGLGMWPDKRRDELPIMPKGRYRIMLDHMPRVGSLGLDMMLR HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH TCTIQTNLDYASEADMVQKFRVSLALQPLATALFASSPFTEGRPNGYLSYRSHIWTDTDP HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCCCCCCCCC ARTGMLPFVFEDGFGYDRYVDYMLDVPMYFVFRDGQYIDAAGQSFRDFLKGELPALPGEL HHHCCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCEEHHHHHHHHHHHCCCCCCCCCCC PRLSDWTDHLSTAFPEVRLKSFLEMRGADGGPWNRICALPALWVGLLYDQDALDAAWDLV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH KGWSIAEQQALRDAVPREGLDAPAPGGGTVGQLAHRVLDIAAAGLAARGEVNSMGDNEVG HCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCC FLEPLRRIAKSGRSPAHDLLDRYEDAWGHDLSRIYDELSF HHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure MREMSTRTASDRHDPVIEHRDQLAAPMADGEKPKERWRIGTEHEKFVYRVSDHRAPSYDE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHEEEEECCCCCCCCCC PGGIHDLLMALTRFGWEPVIEGGKVIALAGSDGTVSLEPAGQLELSGAPLENLHQTCAET CCCHHHHHHHHHHCCCHHHCCCCEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHH GRHLKQVKEVGAELGLGFLGLGMWPDKRRDELPIMPKGRYRIMLDHMPRVGSLGLDMMLR HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH TCTIQTNLDYASEADMVQKFRVSLALQPLATALFASSPFTEGRPNGYLSYRSHIWTDTDP HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCCCCCCCCC ARTGMLPFVFEDGFGYDRYVDYMLDVPMYFVFRDGQYIDAAGQSFRDFLKGELPALPGEL HHHCCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCEEHHHHHHHHHHHCCCCCCCCCCC PRLSDWTDHLSTAFPEVRLKSFLEMRGADGGPWNRICALPALWVGLLYDQDALDAAWDLV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH KGWSIAEQQALRDAVPREGLDAPAPGGGTVGQLAHRVLDIAAAGLAARGEVNSMGDNEVG HCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCC FLEPLRRIAKSGRSPAHDLLDRYEDAWGHDLSRIYDELSF HHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate; L-cysteine
Specific reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA