Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487671

Identifier: 103487671

GI number: 103487671

Start: 2302710

End: 2303378

Strand: Direct

Name: 103487671

Synonym: Sala_2190

Alternate gene names: NA

Gene position: 2302710-2303378 (Clockwise)

Preceding gene: 103487660

Following gene: 103487677

Centisome position: 68.84

GC content: 66.22

Gene sequence:

>669_bases
ATGGCGATAAAGGTTTATCTCAACGACTCCCCTCCCGCGGTCGGCAAGGGGCGCGCCTCGCGGCGCCAGTTGCGCCTGCC
GCTTCATGGATCGAAAGCGACCGGCGCCGAGATCGAGGGACTCGTCCACAATATCTCCGCGACCGGAATGCTCGTCGAAA
GCGACGCGGAGTTCGATGTGGGCGAGATGATCGAGGTCAACCTGCCGCACAGCGGGAAAACCGCAGCCAGGGTGATCTGG
ACGAGCGCGCGCCTCATAGGGTGTCAGTTCGACATGCCGATCTCGCCCGCGACGTTGAGCGCGGCGCAACTGCGCAGCGT
CGTCGTCGAATCGGACGTGCCGCCGCCCGGAGCGGGCGTCGTGAGCGCGTCCGAAACATTCGGCAGCCGCCTTCAGCGAC
TGCGCGTTGCGCGGGAATTGACCCAGGGCCAGCTCGCCGCCCAACTCGGTGTCAGCGAGCCGTCGATCTCGGCATGGGAA
CTCGACAAGGCGCGGCCCAAGGCCGGCCGGATGGAAGCATTGTCCGAAGCGCTGGGCGTCGAGATTTCCGAACTGCTCGG
CATCGACGGCACTGAGCCGCTTGGCACGCTCATCGCGCGCGCCAAGCAACAAATAGCGCGCGCCGCCGGCGTCGGCGTCG
ACCGGGTGCGGGTGACGATCGAAATATAG

Upstream 100 bases:

>100_bases
GTGCATGGTGAACCTGCCGCTTTTTTCGGTCGGCCCGGCGCGCCGAATTAACCCTGTGTCGAAGCAGGATGTTAAGGCTG
TGGTCTTGATGAATACGTGC

Downstream 100 bases:

>100_bases
AGCGGCGTGCTGTATATCTGCCCCTCAGGCTGCGGCACCTCCGATGAAGTGGCGCCCGATCAAGACAGGGTGCGCGAACG
GCCGCTCTGACGCGGCAACA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Xre-Family Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAIKVYLNDSPPAVGKGRASRRQLRLPLHGSKATGAEIEGLVHNISATGMLVESDAEFDVGEMIEVNLPHSGKTAARVIW
TSARLIGCQFDMPISPATLSAAQLRSVVVESDVPPPGAGVVSASETFGSRLQRLRVARELTQGQLAAQLGVSEPSISAWE
LDKARPKAGRMEALSEALGVEISELLGIDGTEPLGTLIARAKQQIARAAGVGVDRVRVTIEI

Sequences:

>Translated_222_residues
MAIKVYLNDSPPAVGKGRASRRQLRLPLHGSKATGAEIEGLVHNISATGMLVESDAEFDVGEMIEVNLPHSGKTAARVIW
TSARLIGCQFDMPISPATLSAAQLRSVVVESDVPPPGAGVVSASETFGSRLQRLRVARELTQGQLAAQLGVSEPSISAWE
LDKARPKAGRMEALSEALGVEISELLGIDGTEPLGTLIARAKQQIARAAGVGVDRVRVTIEI
>Mature_221_residues
AIKVYLNDSPPAVGKGRASRRQLRLPLHGSKATGAEIEGLVHNISATGMLVESDAEFDVGEMIEVNLPHSGKTAARVIWT
SARLIGCQFDMPISPATLSAAQLRSVVVESDVPPPGAGVVSASETFGSRLQRLRVARELTQGQLAAQLGVSEPSISAWEL
DKARPKAGRMEALSEALGVEISELLGIDGTEPLGTLIARAKQQIARAAGVGVDRVRVTIEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23405; Mature: 23274

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKVYLNDSPPAVGKGRASRRQLRLPLHGSKATGAEIEGLVHNISATGMLVESDAEFDV
CEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
GEMIEVNLPHSGKTAARVIWTSARLIGCQFDMPISPATLSAAQLRSVVVESDVPPPGAGV
CCEEEEECCCCCCHHHEEEEEHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCE
VSASETFGSRLQRLRVARELTQGQLAAQLGVSEPSISAWELDKARPKAGRMEALSEALGV
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHCC
EISELLGIDGTEPLGTLIARAKQQIARAAGVGVDRVRVTIEI
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
>Mature Secondary Structure 
AIKVYLNDSPPAVGKGRASRRQLRLPLHGSKATGAEIEGLVHNISATGMLVESDAEFDV
EEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
GEMIEVNLPHSGKTAARVIWTSARLIGCQFDMPISPATLSAAQLRSVVVESDVPPPGAGV
CCEEEEECCCCCCHHHEEEEEHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCE
VSASETFGSRLQRLRVARELTQGQLAAQLGVSEPSISAWELDKARPKAGRMEALSEALGV
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHCC
EISELLGIDGTEPLGTLIARAKQQIARAAGVGVDRVRVTIEI
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA