| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487651
Identifier: 103487651
GI number: 103487651
Start: 2279593
End: 2279829
Strand: Direct
Name: 103487651
Synonym: Sala_2170
Alternate gene names: NA
Gene position: 2279593-2279829 (Clockwise)
Preceding gene: 103487649
Following gene: 103487652
Centisome position: 68.15
GC content: 59.92
Gene sequence:
>237_bases ATGAGCACCGCCCTGACCGACCAGATTTACGGCCTGATCGCCCCGTTCAACAAAAAGGGCATCGCGCTGACCGACGCGAC GACCTTTGCCGGCGACCTGGAATGGGACAGCCTGACGGTGATGGACTTCGTCGCCGAGGTCGAAGACACGTTCGACATCA TCATCAGCATGAACCAGCAGGCCGAGATAGAGAATGTCGGCCAGCTGGTCGCGGCGGTGGAAAAACTGCAGGGCTGA
Upstream 100 bases:
>100_bases GTCGGCAAGATGCTGCCCTGTTCCCGCCGCAATCGCTTGCCAAGCGCGCATCATCGCGCCATTCCCGCGCGCAACATCCT TTCTTTATGGGACGCACCAG
Downstream 100 bases:
>100_bases CCTTTCAGGTTCCGTTCGCATCGAGCGAAGTCGAGATGCCCCTCGCACTTGCGCCATGCCGACGGGTGTCTCGACTTCGC TCGACACGAGCGGACATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSTALTDQIYGLIAPFNKKGIALTDATTFAGDLEWDSLTVMDFVAEVEDTFDIIISMNQQAEIENVGQLVAAVEKLQG
Sequences:
>Translated_78_residues MSTALTDQIYGLIAPFNKKGIALTDATTFAGDLEWDSLTVMDFVAEVEDTFDIIISMNQQAEIENVGQLVAAVEKLQG >Mature_77_residues STALTDQIYGLIAPFNKKGIALTDATTFAGDLEWDSLTVMDFVAEVEDTFDIIISMNQQAEIENVGQLVAAVEKLQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8468; Mature: 8336
Theoretical pI: Translated: 3.56; Mature: 3.56
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTALTDQIYGLIAPFNKKGIALTDATTFAGDLEWDSLTVMDFVAEVEDTFDIIISMNQQ CCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCC AEIENVGQLVAAVEKLQG CCHHHHHHHHHHHHHHCC >Mature Secondary Structure STALTDQIYGLIAPFNKKGIALTDATTFAGDLEWDSLTVMDFVAEVEDTFDIIISMNQQ CCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCC AEIENVGQLVAAVEKLQG CCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA