Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487644

Identifier: 103487644

GI number: 103487644

Start: 2274208

End: 2274792

Strand: Direct

Name: 103487644

Synonym: Sala_2163

Alternate gene names: NA

Gene position: 2274208-2274792 (Clockwise)

Preceding gene: 103487643

Following gene: 103487645

Centisome position: 67.98

GC content: 66.15

Gene sequence:

>585_bases
TTGCGCCTAGACCAACCGCGCATCGAGCCGGTCGATCTGGACCGGCTCGATGCCGACCAGCGCACCGCGCTAGACCCCTT
CCTCGCCAGCGATGGCGGCAAGGTCGGGGGCGGCAAGATCCTCAACATCTTCCGCACGCTGGCGCATGCGCCCAGGGCGC
TCACGGCCTTCCTCGCGTGGGGCAACTATATCCTGTCGCGGCGCAATGCGCTGAGCCCACGGAATCGCGAACTCGTCATC
CTGCGCACCGGCTTTAACTGCCGTTCGGGTTACGAGTGGACGCAGCACAGGCGCATCGGGCTCGATTGCGGATTGAGCGA
GGACGAGATCGCCCGGATCAAGGCGGGACCCGACGCGGGCGGCTGGAACGACCTCGACCGCGCCATGCTGCGCGCGACCG
ACGAACTCACCGCCGACCATTTCGTCAGCGACACGACCTGGGCCGCGCTCGCGCCGCTCGGCGACAAGGGACGGATGGAC
CTGGTGATGACGGTGGGGCAATATACGCAGGTCTCGATGATCCTGAACAGCTTCGGCATTCAGGTCGAGGAAGGATGGGA
GGTCGACCCCGACCTCAAGGCCTGA

Upstream 100 bases:

>100_bases
GCGCTGATCGAAGGCAAGCGCCGCGGCGTGAAGTACGCCGTCGTGACAATGTGCATCGGCGGCGGCCAGGGCGCGGCAGG
CCTGTTCGAGGTCTTCTGAT

Downstream 100 bases:

>100_bases
CGGGAAGGAAGAAGCACATGACTGCCATCGGCATTATCGCCACGCTGCGCGTGCAGCCGGGCAAGGAAGAGGCGTTCGAA
GGCGTCTTCGCCGAACTCGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: Alkylhydroperoxidase; Alkylhydroperoxidase Like Protein; Carboxymuconolactone Decarboxylase Protein; 4-Carboxymuconolactone Decarboxylase

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRLDQPRIEPVDLDRLDADQRTALDPFLASDGGKVGGGKILNIFRTLAHAPRALTAFLAWGNYILSRRNALSPRNRELVI
LRTGFNCRSGYEWTQHRRIGLDCGLSEDEIARIKAGPDAGGWNDLDRAMLRATDELTADHFVSDTTWAALAPLGDKGRMD
LVMTVGQYTQVSMILNSFGIQVEEGWEVDPDLKA

Sequences:

>Translated_194_residues
MRLDQPRIEPVDLDRLDADQRTALDPFLASDGGKVGGGKILNIFRTLAHAPRALTAFLAWGNYILSRRNALSPRNRELVI
LRTGFNCRSGYEWTQHRRIGLDCGLSEDEIARIKAGPDAGGWNDLDRAMLRATDELTADHFVSDTTWAALAPLGDKGRMD
LVMTVGQYTQVSMILNSFGIQVEEGWEVDPDLKA
>Mature_194_residues
MRLDQPRIEPVDLDRLDADQRTALDPFLASDGGKVGGGKILNIFRTLAHAPRALTAFLAWGNYILSRRNALSPRNRELVI
LRTGFNCRSGYEWTQHRRIGLDCGLSEDEIARIKAGPDAGGWNDLDRAMLRATDELTADHFVSDTTWAALAPLGDKGRMD
LVMTVGQYTQVSMILNSFGIQVEEGWEVDPDLKA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21554; Mature: 21554

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDQPRIEPVDLDRLDADQRTALDPFLASDGGKVGGGKILNIFRTLAHAPRALTAFLAW
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHH
GNYILSRRNALSPRNRELVILRTGFNCRSGYEWTQHRRIGLDCGLSEDEIARIKAGPDAG
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHCCEECCCCCCCHHHEEEEECCCCCC
GWNDLDRAMLRATDELTADHFVSDTTWAALAPLGDKGRMDLVMTVGQYTQVSMILNSFGI
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCC
QVEEGWEVDPDLKA
EECCCCCCCCCCCC
>Mature Secondary Structure
MRLDQPRIEPVDLDRLDADQRTALDPFLASDGGKVGGGKILNIFRTLAHAPRALTAFLAW
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHH
GNYILSRRNALSPRNRELVILRTGFNCRSGYEWTQHRRIGLDCGLSEDEIARIKAGPDAG
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHCCEECCCCCCCHHHEEEEECCCCCC
GWNDLDRAMLRATDELTADHFVSDTTWAALAPLGDKGRMDLVMTVGQYTQVSMILNSFGI
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCC
QVEEGWEVDPDLKA
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA