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The map label for this gene is nodN [H]

Identifier: 103487642

GI number: 103487642

Start: 2272515

End: 2272973

Strand: Direct

Name: nodN [H]

Synonym: Sala_2161

Alternate gene names: 103487642

Gene position: 2272515-2272973 (Clockwise)

Preceding gene: 103487641

Following gene: 103487643

Centisome position: 67.93

GC content: 60.35

Gene sequence:

>459_bases
ATGGCCACCATCACGCCGCAGGAGTTGCAGTCGAAGGTCGGGCAGCATCTCGGCACCTCCGATTGGGTGCTCGTCGATCA
GGAGATGATCAACAAGTTCGCCGATGCGACGGGCGATCATCAGTTCATCCATATCGACGAGGAAAAGGCCAAGCAGACGC
CGTTCGGCGGCACGATCGCGCACGGCTTCCTCACCCTGTCGCTGATGCCGATGCTCGGTCAGAGCACCGACGGGCCGAAA
GTCGGCGGCGTCAAGATGGGCGTCAACTATGGCTGCAACAAGGTTCGTTTCCTGTCGCCCGTCCGTTCGGGCAAGCGCGT
GCGCAGCCATGTGAAGCTGCTCGAACTGGAAGAAAAGCGCCCCGGCCAGTGGCAGCAGACCAACGAAGTGACGATAGAGA
TCGAGGGCGAGGAAAAGCCCGCCCTGATCGCCGAATGGATCAGCCAGTTTTTCGTTTGA

Upstream 100 bases:

>100_bases
TGGCTGACGCTACGGCGCCTTGGTCAAAGCCCTTGGCCCTTGTGCAACGCGGCAGGAGAGGCCTAGAACGCGCCCCGAAG
CAGCATAGAGGGGATGACAA

Downstream 100 bases:

>100_bases
GCGCCCTCCCCGGCAAAGACCCGTTCAAATTGACCAAGAAGGATTTTCATCATGCGTGACGCCGTTATCGTTTCCACCGC
CCGCACCCCGCTGACCAAGG

Product: MaoC-like dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MATITPQELQSKVGQHLGTSDWVLVDQEMINKFADATGDHQFIHIDEEKAKQTPFGGTIAHGFLTLSLMPMLGQSTDGPK
VGGVKMGVNYGCNKVRFLSPVRSGKRVRSHVKLLELEEKRPGQWQQTNEVTIEIEGEEKPALIAEWISQFFV

Sequences:

>Translated_152_residues
MATITPQELQSKVGQHLGTSDWVLVDQEMINKFADATGDHQFIHIDEEKAKQTPFGGTIAHGFLTLSLMPMLGQSTDGPK
VGGVKMGVNYGCNKVRFLSPVRSGKRVRSHVKLLELEEKRPGQWQQTNEVTIEIEGEEKPALIAEWISQFFV
>Mature_151_residues
ATITPQELQSKVGQHLGTSDWVLVDQEMINKFADATGDHQFIHIDEEKAKQTPFGGTIAHGFLTLSLMPMLGQSTDGPKV
GGVKMGVNYGCNKVRFLSPVRSGKRVRSHVKLLELEEKRPGQWQQTNEVTIEIEGEEKPALIAEWISQFFV

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.leguminosarum biovar viciae counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 16948; Mature: 16816

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATITPQELQSKVGQHLGTSDWVLVDQEMINKFADATGDHQFIHIDEEKAKQTPFGGTIA
CCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCHHH
HGFLTLSLMPMLGQSTDGPKVGGVKMGVNYGCNKVRFLSPVRSGKRVRSHVKLLELEEKR
HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEECCHHHCCHHHHHHHHHHHHHCCC
PGQWQQTNEVTIEIEGEEKPALIAEWISQFFV
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ATITPQELQSKVGQHLGTSDWVLVDQEMINKFADATGDHQFIHIDEEKAKQTPFGGTIA
CCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCEEEEECHHHHHCCCCCCHHH
HGFLTLSLMPMLGQSTDGPKVGGVKMGVNYGCNKVRFLSPVRSGKRVRSHVKLLELEEKR
HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEECCHHHCCHHHHHHHHHHHHHCCC
PGQWQQTNEVTIEIEGEEKPALIAEWISQFFV
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]