| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is crcB
Identifier: 103487582
GI number: 103487582
Start: 2208965
End: 2209345
Strand: Direct
Name: crcB
Synonym: Sala_2101
Alternate gene names: 103487582
Gene position: 2208965-2209345 (Clockwise)
Preceding gene: 103487581
Following gene: 103487583
Centisome position: 66.03
GC content: 65.62
Gene sequence:
>381_bases ATGAACAGCCTGTTTCCCGTCATGGTTGGTGGCGCGGTCGGCGCCGGAGCCCGCCACCTGGTCGGGCAGGCGATGCTCGC GCGGTTCGGCCCCGGCTTTCCGTGGTGGACGCTTTCCGTCAATATCGTCGGCAGTCTTGCCATGGGGCTGCTGATCGGAC TGCTTGCGCGCAGCGGCACGGGCGGCGAGACGACACGGCTGTTCGTCGGAGTCGGCATGTTGGGTGGATTCACGACCTTC TCCAGCTTCAGCATGGAGTTCTGGCTGCTGTTCGAACGGGGGCAGAGTGTTCAGGCGGGCCTTTATGTGGTCGCATCGGT CGTCGGGGCGCTGCTGGCCTGCGGTGCCGGCATGATCCTGATCCGGCAGCTTCCGGCATGA
Upstream 100 bases:
>100_bases CTGGCGCGTCGCGCACGAGCGCCCCGCGAAGGCCGACGCGATCCCCGGCGCATAGCAATGCGCCTTTGCCTCGCCGCGGA TTCGGGCTAGGGCGAGCGGC
Downstream 100 bases:
>100_bases ACGCGCGCAAGACGCCGCTCGACGACGCGGTCATAGGCGAAGAGGACGACGGCATTCGCCTCGACCGCTGGTTCAAGCGC CACCGGCCGGGGACGCCGCA
Product: crcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MNSLFPVMVGGAVGAGARHLVGQAMLARFGPGFPWWTLSVNIVGSLAMGLLIGLLARSGTGGETTRLFVGVGMLGGFTTF SSFSMEFWLLFERGQSVQAGLYVVASVVGALLACGAGMILIRQLPA
Sequences:
>Translated_126_residues MNSLFPVMVGGAVGAGARHLVGQAMLARFGPGFPWWTLSVNIVGSLAMGLLIGLLARSGTGGETTRLFVGVGMLGGFTTF SSFSMEFWLLFERGQSVQAGLYVVASVVGALLACGAGMILIRQLPA >Mature_126_residues MNSLFPVMVGGAVGAGARHLVGQAMLARFGPGFPWWTLSVNIVGSLAMGLLIGLLARSGTGGETTRLFVGVGMLGGFTTF SSFSMEFWLLFERGQSVQAGLYVVASVVGALLACGAGMILIRQLPA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_SPHAL (Q1GRB2)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617143.1 - GeneID: 4080076 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2101 - NMPDR: fig|317655.9.peg.2028 - HOGENOM: HBG753179 - OMA: SAWALRA - BioCyc: SALA317655:SALA_2101-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13025; Mature: 13025
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1366e6e8)-; HASH(0x13b28e20)-; HASH(0x13b606b8)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLFPVMVGGAVGAGARHLVGQAMLARFGPGFPWWTLSVNIVGSLAMGLLIGLLARSGT CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCC GGETTRLFVGVGMLGGFTTFSSFSMEFWLLFERGQSVQAGLYVVASVVGALLACGAGMIL CCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE IRQLPA HEECCH >Mature Secondary Structure MNSLFPVMVGGAVGAGARHLVGQAMLARFGPGFPWWTLSVNIVGSLAMGLLIGLLARSGT CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCC GGETTRLFVGVGMLGGFTTFSSFSMEFWLLFERGQSVQAGLYVVASVVGALLACGAGMIL CCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE IRQLPA HEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA