Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is chvG [H]

Identifier: 103487529

GI number: 103487529

Start: 2158776

End: 2160281

Strand: Direct

Name: chvG [H]

Synonym: Sala_2048

Alternate gene names: 103487529

Gene position: 2158776-2160281 (Clockwise)

Preceding gene: 103487528

Following gene: 103487530

Centisome position: 64.53

GC content: 70.39

Gene sequence:

>1506_bases
GTGAACATCCTCGCCGTCGCGCTGCTCGCGGGGGGATTCTATTATCTCGACACCTATCGCACGCGGCTCGTCGATACGCG
CATCGCGGTGATGGAGGACCAGCTTGCGATGCTCGATACCGCGCTCGAAGCGGCGCGCCCCGAGGAGCGCGACCGGCTGA
TCGGCGAATTTGCCGAAGCGACCGAGTCGCGCCTGCGCTTCTATGCCGCCGACGGTCGCCTGATTTCGGACAGTTTCCAA
ACCGGCGCGCCGACCTATACGCTGCGCGACCCCGATCTGCAGGCGTGGCAGCGCGATGTGGCGCGTGCGATGGACCGCGG
CATCGACTGGATCGTCGGCGCGCCGACCTATCCCGACTTTCGCGAACCGGCGGTCGATGTCGCGGCGGCCTGGCCCGAAG
TGATCGAGGCGCAGCGCAGCGGGCAGCCGGCGAGCCGCTTTCGCTATGCCCCCGAACGCACGCCGCTCTTGAGCGCGGCG
CGGGTCGTCGAACTCGATACGCCGCAGACGGTGCTGATGACGCTCAACGCGCGCGACATCACGCGCACGGTGCGCGCCGA
ACGCTTCCGCCTCGCGGTCGTCGTCGCGATGGTGCTGATCACCTCGATCCTGTTGTCACTGTTCCTCGCCCGCACGATCG
TGCGCCCGCTGCGGCGGCTCGCGCGCGCCGCGGTGCGCGTCCGCCTCGGTCGCGCGCGCGAGGTCGTCGTCCCGCGCCTG
CCGAGTCGCCGCGACGAGATCGGCACGCTCGCCCGCGCCTTGAGCGACATGACGCAAGCGCTTCGTGAACGCATCGACGC
GGGCGAGCATTTCGCCGCCGACGTGACGCACGAGCTCAAGAATCCGATCGCCTCGGTGCGTTCGGCGATCGAGGGGCTGG
GGCGCGTGCAGTCCGACGAACAGCGCGCGCAATTGCTCGCCATCGCCGACGAGGATGTGCGGCGGCTCGACCGGCTGGTG
AGCGACATCAGCGAGGCGAGCCGCGTCGACGCGCAATTGTCGCGCACCCTGTTCGAGCCGATCGACGTGGGCATGATGAT
CGAATCGATGCTCGCATCGCGCAAGGCGCGCATCGACCCCGACGCGCCGCACCCGCGCCTCGCCTTCGCGCGCCCGCGCA
AGGGCACCACCATCGTGATGGGCGACGGCCACCGCCTCGAACGCGCCATCGACAATGTCATCGACAACGCCATCAGCTTC
TCCCCCCCCTCCGGCCTCGTGTGCATCGCCGCGACGCGGCTGGGCGACGAGGTGCATGTCCGCGTCGACGACGACGGCCC
CGGCATCGACCCCGCGCAGCGCGAGGCGATTTTCCGGCGCTTTCACAGCGAGCGGCCCGCGGGCGAAGCCTTTGGCCGCC
ACAGCGGCCTCGGCCTCGCCATCGCGCGCACGATCGTCGAGGGGCATGGCGGCACGATCAGCGCCAGGGACCGCGACGAC
GGCAGGCCGGGCGCCAGCCTGCTCATCACCCTGCCCGCGAGCGAAAGCGGAACCGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
GAGGGCTGATCCCCTGCCCCCCGACGCGAGCGCCGCCGAACAGGAGGAATCGCCGCTCGTCTGGTCGGCGCGCTGGTCGC
TGACGACGCGCATCCTGGCG

Downstream 100 bases:

>100_bases
CTCCACGCCCTATCGCCTTGCAGCCCCGCGTCGCCGCCGGTAAGCCGTCGTCATGCTTCCGAGCCGGACCAGACCCGAAA
TCGTCAACATCCACGCGAGC

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEATESRLRFYAADGRLISDSFQ
TGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDFREPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAA
RVVELDTPQTVLMTLNARDITRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL
PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDEQRAQLLAIADEDVRRLDRLV
SDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDPDAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISF
SPPSGLVCIAATRLGDEVHVRVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD
GRPGASLLITLPASESGTAAG

Sequences:

>Translated_501_residues
MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEATESRLRFYAADGRLISDSFQ
TGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDFREPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAA
RVVELDTPQTVLMTLNARDITRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL
PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDEQRAQLLAIADEDVRRLDRLV
SDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDPDAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISF
SPPSGLVCIAATRLGDEVHVRVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD
GRPGASLLITLPASESGTAAG
>Mature_501_residues
MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEATESRLRFYAADGRLISDSFQ
TGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDFREPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAA
RVVELDTPQTVLMTLNARDITRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL
PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDEQRAQLLAIADEDVRRLDRLV
SDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDPDAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISF
SPPSGLVCIAATRLGDEVHVRVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD
GRPGASLLITLPASESGTAAG

Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790346, Length=278, Percent_Identity=29.136690647482, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788393, Length=285, Percent_Identity=28.0701754385965, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1790436, Length=365, Percent_Identity=24.6575342465753, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786912, Length=223, Percent_Identity=28.6995515695067, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788279, Length=284, Percent_Identity=26.056338028169, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1786783, Length=311, Percent_Identity=25.7234726688103, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790861, Length=304, Percent_Identity=28.2894736842105, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1787374, Length=299, Percent_Identity=28.0936454849498, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786600, Length=246, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87082128, Length=308, Percent_Identity=23.3766233766234, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787894, Length=310, Percent_Identity=26.4516129032258, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789808, Length=310, Percent_Identity=24.8387096774194, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=26.5060240963855, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788549, Length=250, Percent_Identity=23.2, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790551, Length=312, Percent_Identity=25.3205128205128, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=27.2388059701493, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 55122; Mature: 55122

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TESRLRFYAADGRLISDSFQTGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDF
HHHHHEEEECCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
REPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAARVVELDTPQTVLMTLNARDI
CCCHHHHHHHCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHEEECCCCCEEEEEECHHHH
TRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QRAQLLAIADEDVRRLDRLVSDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISFSPPSGLVCIAATRLGDEVHV
CCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE
RVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD
EECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCC
GRPGASLLITLPASESGTAAG
CCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TESRLRFYAADGRLISDSFQTGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDF
HHHHHEEEECCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
REPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAARVVELDTPQTVLMTLNARDI
CCCHHHHHHHCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHEEECCCCCEEEEEECHHHH
TRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QRAQLLAIADEDVRRLDRLVSDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISFSPPSGLVCIAATRLGDEVHV
CCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE
RVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD
EECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCC
GRPGASLLITLPASESGTAAG
CCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8407839; 11743193; 11743194 [H]