| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is chvG [H]
Identifier: 103487529
GI number: 103487529
Start: 2158776
End: 2160281
Strand: Direct
Name: chvG [H]
Synonym: Sala_2048
Alternate gene names: 103487529
Gene position: 2158776-2160281 (Clockwise)
Preceding gene: 103487528
Following gene: 103487530
Centisome position: 64.53
GC content: 70.39
Gene sequence:
>1506_bases GTGAACATCCTCGCCGTCGCGCTGCTCGCGGGGGGATTCTATTATCTCGACACCTATCGCACGCGGCTCGTCGATACGCG CATCGCGGTGATGGAGGACCAGCTTGCGATGCTCGATACCGCGCTCGAAGCGGCGCGCCCCGAGGAGCGCGACCGGCTGA TCGGCGAATTTGCCGAAGCGACCGAGTCGCGCCTGCGCTTCTATGCCGCCGACGGTCGCCTGATTTCGGACAGTTTCCAA ACCGGCGCGCCGACCTATACGCTGCGCGACCCCGATCTGCAGGCGTGGCAGCGCGATGTGGCGCGTGCGATGGACCGCGG CATCGACTGGATCGTCGGCGCGCCGACCTATCCCGACTTTCGCGAACCGGCGGTCGATGTCGCGGCGGCCTGGCCCGAAG TGATCGAGGCGCAGCGCAGCGGGCAGCCGGCGAGCCGCTTTCGCTATGCCCCCGAACGCACGCCGCTCTTGAGCGCGGCG CGGGTCGTCGAACTCGATACGCCGCAGACGGTGCTGATGACGCTCAACGCGCGCGACATCACGCGCACGGTGCGCGCCGA ACGCTTCCGCCTCGCGGTCGTCGTCGCGATGGTGCTGATCACCTCGATCCTGTTGTCACTGTTCCTCGCCCGCACGATCG TGCGCCCGCTGCGGCGGCTCGCGCGCGCCGCGGTGCGCGTCCGCCTCGGTCGCGCGCGCGAGGTCGTCGTCCCGCGCCTG CCGAGTCGCCGCGACGAGATCGGCACGCTCGCCCGCGCCTTGAGCGACATGACGCAAGCGCTTCGTGAACGCATCGACGC GGGCGAGCATTTCGCCGCCGACGTGACGCACGAGCTCAAGAATCCGATCGCCTCGGTGCGTTCGGCGATCGAGGGGCTGG GGCGCGTGCAGTCCGACGAACAGCGCGCGCAATTGCTCGCCATCGCCGACGAGGATGTGCGGCGGCTCGACCGGCTGGTG AGCGACATCAGCGAGGCGAGCCGCGTCGACGCGCAATTGTCGCGCACCCTGTTCGAGCCGATCGACGTGGGCATGATGAT CGAATCGATGCTCGCATCGCGCAAGGCGCGCATCGACCCCGACGCGCCGCACCCGCGCCTCGCCTTCGCGCGCCCGCGCA AGGGCACCACCATCGTGATGGGCGACGGCCACCGCCTCGAACGCGCCATCGACAATGTCATCGACAACGCCATCAGCTTC TCCCCCCCCTCCGGCCTCGTGTGCATCGCCGCGACGCGGCTGGGCGACGAGGTGCATGTCCGCGTCGACGACGACGGCCC CGGCATCGACCCCGCGCAGCGCGAGGCGATTTTCCGGCGCTTTCACAGCGAGCGGCCCGCGGGCGAAGCCTTTGGCCGCC ACAGCGGCCTCGGCCTCGCCATCGCGCGCACGATCGTCGAGGGGCATGGCGGCACGATCAGCGCCAGGGACCGCGACGAC GGCAGGCCGGGCGCCAGCCTGCTCATCACCCTGCCCGCGAGCGAAAGCGGAACCGCCGCCGGCTGA
Upstream 100 bases:
>100_bases GAGGGCTGATCCCCTGCCCCCCGACGCGAGCGCCGCCGAACAGGAGGAATCGCCGCTCGTCTGGTCGGCGCGCTGGTCGC TGACGACGCGCATCCTGGCG
Downstream 100 bases:
>100_bases CTCCACGCCCTATCGCCTTGCAGCCCCGCGTCGCCGCCGGTAAGCCGTCGTCATGCTTCCGAGCCGGACCAGACCCGAAA TCGTCAACATCCACGCGAGC
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEATESRLRFYAADGRLISDSFQ TGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDFREPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAA RVVELDTPQTVLMTLNARDITRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDEQRAQLLAIADEDVRRLDRLV SDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDPDAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISF SPPSGLVCIAATRLGDEVHVRVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD GRPGASLLITLPASESGTAAG
Sequences:
>Translated_501_residues MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEATESRLRFYAADGRLISDSFQ TGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDFREPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAA RVVELDTPQTVLMTLNARDITRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDEQRAQLLAIADEDVRRLDRLV SDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDPDAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISF SPPSGLVCIAATRLGDEVHVRVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD GRPGASLLITLPASESGTAAG >Mature_501_residues MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEATESRLRFYAADGRLISDSFQ TGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDFREPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAA RVVELDTPQTVLMTLNARDITRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDEQRAQLLAIADEDVRRLDRLV SDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDPDAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISF SPPSGLVCIAATRLGDEVHVRVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD GRPGASLLITLPASESGTAAG
Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=278, Percent_Identity=29.136690647482, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788393, Length=285, Percent_Identity=28.0701754385965, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1790436, Length=365, Percent_Identity=24.6575342465753, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=223, Percent_Identity=28.6995515695067, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788279, Length=284, Percent_Identity=26.056338028169, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786783, Length=311, Percent_Identity=25.7234726688103, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790861, Length=304, Percent_Identity=28.2894736842105, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787374, Length=299, Percent_Identity=28.0936454849498, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786600, Length=246, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87082128, Length=308, Percent_Identity=23.3766233766234, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787894, Length=310, Percent_Identity=26.4516129032258, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789808, Length=310, Percent_Identity=24.8387096774194, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=26.5060240963855, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788549, Length=250, Percent_Identity=23.2, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=312, Percent_Identity=25.3205128205128, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=27.2388059701493, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 55122; Mature: 55122
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEA CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TESRLRFYAADGRLISDSFQTGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDF HHHHHEEEECCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC REPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAARVVELDTPQTVLMTLNARDI CCCHHHHHHHCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHEEECCCCCEEEEEECHHHH TRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QRAQLLAIADEDVRRLDRLVSDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISFSPPSGLVCIAATRLGDEVHV CCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE RVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD EECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCC GRPGASLLITLPASESGTAAG CCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MNILAVALLAGGFYYLDTYRTRLVDTRIAVMEDQLAMLDTALEAARPEERDRLIGEFAEA CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH TESRLRFYAADGRLISDSFQTGAPTYTLRDPDLQAWQRDVARAMDRGIDWIVGAPTYPDF HHHHHEEEECCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC REPAVDVAAAWPEVIEAQRSGQPASRFRYAPERTPLLSAARVVELDTPQTVLMTLNARDI CCCHHHHHHHCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHEEECCCCCEEEEEECHHHH TRTVRAERFRLAVVVAMVLITSILLSLFLARTIVRPLRRLARAAVRVRLGRAREVVVPRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC PSRRDEIGTLARALSDMTQALRERIDAGEHFAADVTHELKNPIASVRSAIEGLGRVQSDE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QRAQLLAIADEDVRRLDRLVSDISEASRVDAQLSRTLFEPIDVGMMIESMLASRKARIDP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DAPHPRLAFARPRKGTTIVMGDGHRLERAIDNVIDNAISFSPPSGLVCIAATRLGDEVHV CCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE RVDDDGPGIDPAQREAIFRRFHSERPAGEAFGRHSGLGLAIARTIVEGHGGTISARDRDD EECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCC GRPGASLLITLPASESGTAAG CCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407839; 11743193; 11743194 [H]