Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487521

Identifier: 103487521

GI number: 103487521

Start: 2151237

End: 2151746

Strand: Reverse

Name: 103487521

Synonym: Sala_2040

Alternate gene names: NA

Gene position: 2151746-2151237 (Counterclockwise)

Preceding gene: 103487526

Following gene: 103487520

Centisome position: 64.32

GC content: 78.24

Gene sequence:

>510_bases
ATGAAGCACAGCCTCCTTTCCGTCCTGCTCGCCCTGCCGCTGTCGGCCTGCGCCGCGGGCGCCAGCGGCGACGCGCCCTC
GCTCGCCAAGCGCCCGGTCGAGGGGCGGTTCGACGTCGCGCCGCCGCCCGTGGCGGTTCCGCCGCCGGGTCCGCTTCCCG
CCGACCTCGCCGGGCGGCTCGCCCGGTGGAAGGCCGACGCCGCCGCCGGTGAGCGCGCCTTTGCCGCCGAACACAGCGCG
GCGGCCACGCGCGTCGCGGCCGCGGCGGGGGCGCCGGTCGCCAGCGAGCGCTGGATCGTCGCGCAACAGGCGATCTCGCG
CCTCGTCGCCGCGCGCGCGCCGGTCAGCGCGGCGCTCGCCGACATCGACCGCCTCTATGTCGAGCGGAGCGTCGCGGAAG
CGGTCGACGGGCTTCCCGCCATCCATGCGCTGCGCGAACGCCTCGCCGGGCTGGTGTCGGCGCAGGACGCAGCGATCGCC
GCGCTCGCTGCCGAGCTGCCGGGCGCCTGA

Upstream 100 bases:

>100_bases
CCGCGCTTTTCATCCCGATGCCGATGCGCGCGGGCTTTATCGGCGGCGGCGCCGATTCGGCCCTTGCTGCACCGGCCGCG
CCCCCATATCAGGGGCGGCG

Downstream 100 bases:

>100_bases
TCCGCCCCGGCGCGACCGCGTCGTCCGGCATCGCGCCGGGCGCCCCGCCCGTCATTACCCGCCGCGTCATTGCCCGCGCC
GCGCCGCGCGTCCTATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKHSLLSVLLALPLSACAAGASGDAPSLAKRPVEGRFDVAPPPVAVPPPGPLPADLAGRLARWKADAAAGERAFAAEHSA
AATRVAAAAGAPVASERWIVAQQAISRLVAARAPVSAALADIDRLYVERSVAEAVDGLPAIHALRERLAGLVSAQDAAIA
ALAAELPGA

Sequences:

>Translated_169_residues
MKHSLLSVLLALPLSACAAGASGDAPSLAKRPVEGRFDVAPPPVAVPPPGPLPADLAGRLARWKADAAAGERAFAAEHSA
AATRVAAAAGAPVASERWIVAQQAISRLVAARAPVSAALADIDRLYVERSVAEAVDGLPAIHALRERLAGLVSAQDAAIA
ALAAELPGA
>Mature_169_residues
MKHSLLSVLLALPLSACAAGASGDAPSLAKRPVEGRFDVAPPPVAVPPPGPLPADLAGRLARWKADAAAGERAFAAEHSA
AATRVAAAAGAPVASERWIVAQQAISRLVAARAPVSAALADIDRLYVERSVAEAVDGLPAIHALRERLAGLVSAQDAAIA
ALAAELPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16920; Mature: 16920

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSLLSVLLALPLSACAAGASGDAPSLAKRPVEGRFDVAPPPVAVPPPGPLPADLAGRL
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ARWKADAAAGERAFAAEHSAAATRVAAAAGAPVASERWIVAQQAISRLVAARAPVSAALA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
DIDRLYVERSVAEAVDGLPAIHALRERLAGLVSAQDAAIAALAAELPGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHSLLSVLLALPLSACAAGASGDAPSLAKRPVEGRFDVAPPPVAVPPPGPLPADLAGRL
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ARWKADAAAGERAFAAEHSAAATRVAAAAGAPVASERWIVAQQAISRLVAARAPVSAALA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
DIDRLYVERSVAEAVDGLPAIHALRERLAGLVSAQDAAIAALAAELPGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA