Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is yfiQ [C]
Identifier: 103487518
GI number: 103487518
Start: 2144457
End: 2145104
Strand: Reverse
Name: yfiQ [C]
Synonym: Sala_2035
Alternate gene names: 103487518
Gene position: 2145104-2144457 (Counterclockwise)
Preceding gene: 103487519
Following gene: 103487517
Centisome position: 64.13
GC content: 69.14
Gene sequence:
>648_bases ATGACCGGGACGGACGGGCAGGACGCTGGGCGGACGAAAGGCGCGGTGCCGCGGCGCCGGATCGAGGATGTCGAAATCCA CAGCCGGCTCAACGACGGCACCGCCGTCTGTCTGCGCACGATCACCCCCGACGACGCCCCGCTGATCCGCGACGGCATCG CCCGTCTTTCGGCTGAATCGCGCTATCTGCGTTTCTTCTCGCCGGCGCCTGCTCTGCCCGATGCGGTGATCGAGCGCCTC GTCGACGTCGACGGGCACGACCATATCGCCTGGGGCGCGATCTGCAGTTCATGCCCTGACCGCCCCGCGATCGGCGCGGT CCATGCTGTGCGTCACCGCGCCGACGGCCCGGTCGGCGAGTTTTCGGTGGCGGTGCTCGACGCGTTTCACGGCCAGGGGC TCGCCCGGATGATGACCGCGGCGCTGCTCGTCCATTGTCTGGCCGAGGGACTTGTCGAACTCGACGTTCACATGCTGTCC GAAAATGCCGCAGCGCGGCGGCTGGTCAAGGCGCTCGGCGCCAGCTGGGCGGGCGAAACGGCAGGCGTCGCCGAATATCG GCTCGACGTCGCGGCTGGATTGGAATCCTTGCGTGCCGATGCGGATGCGCCGGGCGTGCGCGACGTGCTGGCGGCGCTTG ATGCCTAG
Upstream 100 bases:
>100_bases CGCGGCGCTGCGGATGGGCGACGACGGTTAGGTCGCGGCGGGTCAGCGCCGTTGCGATGACGGGGTAGCCACTCTATCCT GTCCTGATCGGGAGGCCGCG
Downstream 100 bases:
>100_bases GGTCAGGACCCATTGATTACCCGTTCGAGGTTTGAGGCGATTTTGCTCAGGGCGAGGAGGAAAGGCGCAGGAATATGGAT ATATTTCAAGACTTTTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; GCN5 N-Acetyltransferase; Acetyl-CoA Synthetase
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTGTDGQDAGRTKGAVPRRRIEDVEIHSRLNDGTAVCLRTITPDDAPLIRDGIARLSAESRYLRFFSPAPALPDAVIERL VDVDGHDHIAWGAICSSCPDRPAIGAVHAVRHRADGPVGEFSVAVLDAFHGQGLARMMTAALLVHCLAEGLVELDVHMLS ENAAARRLVKALGASWAGETAGVAEYRLDVAAGLESLRADADAPGVRDVLAALDA
Sequences:
>Translated_215_residues MTGTDGQDAGRTKGAVPRRRIEDVEIHSRLNDGTAVCLRTITPDDAPLIRDGIARLSAESRYLRFFSPAPALPDAVIERL VDVDGHDHIAWGAICSSCPDRPAIGAVHAVRHRADGPVGEFSVAVLDAFHGQGLARMMTAALLVHCLAEGLVELDVHMLS ENAAARRLVKALGASWAGETAGVAEYRLDVAAGLESLRADADAPGVRDVLAALDA >Mature_214_residues TGTDGQDAGRTKGAVPRRRIEDVEIHSRLNDGTAVCLRTITPDDAPLIRDGIARLSAESRYLRFFSPAPALPDAVIERLV DVDGHDHIAWGAICSSCPDRPAIGAVHAVRHRADGPVGEFSVAVLDAFHGQGLARMMTAALLVHCLAEGLVELDVHMLSE NAAARRLVKALGASWAGETAGVAEYRLDVAAGLESLRADADAPGVRDVLAALDA
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22683; Mature: 22552
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTDGQDAGRTKGAVPRRRIEDVEIHSRLNDGTAVCLRTITPDDAPLIRDGIARLSAES CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH RYLRFFSPAPALPDAVIERLVDVDGHDHIAWGAICSSCPDRPAIGAVHAVRHRADGPVGE HHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCH FSVAVLDAFHGQGLARMMTAALLVHCLAEGLVELDVHMLSENAAARRLVKALGASWAGET HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC AGVAEYRLDVAAGLESLRADADAPGVRDVLAALDA CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure TGTDGQDAGRTKGAVPRRRIEDVEIHSRLNDGTAVCLRTITPDDAPLIRDGIARLSAES CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH RYLRFFSPAPALPDAVIERLVDVDGHDHIAWGAICSSCPDRPAIGAVHAVRHRADGPVGE HHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCH FSVAVLDAFHGQGLARMMTAALLVHCLAEGLVELDVHMLSENAAARRLVKALGASWAGET HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC AGVAEYRLDVAAGLESLRADADAPGVRDVLAALDA CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA