Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103487416
Identifier: 103487416
GI number: 103487416
Start: 2038168
End: 2038446
Strand: Direct
Name: 103487416
Synonym: Sala_1932
Alternate gene names: NA
Gene position: 2038168-2038446 (Clockwise)
Preceding gene: 103487415
Following gene: 103487417
Centisome position: 60.93
GC content: 64.16
Gene sequence:
>279_bases GTGACCGATTCCGTCTCCGAAACATCGGGCGTCGATGCCGCCCTCCGCGCGCTGCTCGCCGACGTGCTCGGCCTCGGCGC CGACCGCGCTGCGGCGCTCACCGACGACAGCGGGCTGTTCGGCGCGCTTCCCGAATTTGATTCGATGGCGGTCGCGACGG TGCTGACCGAGATGGAAGACCGTCTCGGCATCCTCATCGACGATGACGAGATCGATGGCGAGATATTTGAAACCTATGGC CATCTGCTGGCATTCGCGACACGCAAGGTGACCGGTTGA
Upstream 100 bases:
>100_bases ATGATCCGCTCTGGCGCATCGAGGCTTTCAATCTGTCGCGCGCCACGGCATGGGAACCGGCGTTGAAGGCCTTTGCCCGA TCGCTGCTGAGGAAAGACAA
Downstream 100 bases:
>100_bases TAAACAGGACGCTCTCCTTTCATCGTCATCCCGGCGAAGGCCGGGGCCTCGCCGCGACCGGGAACGCGACGGCAAGACCC CGGCTTTCGCCGGGATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTDSVSETSGVDAALRALLADVLGLGADRAAALTDDSGLFGALPEFDSMAVATVLTEMEDRLGILIDDDEIDGEIFETYG HLLAFATRKVTG
Sequences:
>Translated_92_residues MTDSVSETSGVDAALRALLADVLGLGADRAAALTDDSGLFGALPEFDSMAVATVLTEMEDRLGILIDDDEIDGEIFETYG HLLAFATRKVTG >Mature_91_residues TDSVSETSGVDAALRALLADVLGLGADRAAALTDDSGLFGALPEFDSMAVATVLTEMEDRLGILIDDDEIDGEIFETYGH LLAFATRKVTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9636; Mature: 9505
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSVSETSGVDAALRALLADVLGLGADRAAALTDDSGLFGALPEFDSMAVATVLTEMED CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH RLGILIDDDEIDGEIFETYGHLLAFATRKVTG HCCEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDSVSETSGVDAALRALLADVLGLGADRAAALTDDSGLFGALPEFDSMAVATVLTEMED CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH RLGILIDDDEIDGEIFETYGHLLAFATRKVTG HCCEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA