Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487275

Identifier: 103487275

GI number: 103487275

Start: 1888530

End: 1889312

Strand: Direct

Name: 103487275

Synonym: Sala_1791

Alternate gene names: NA

Gene position: 1888530-1889312 (Clockwise)

Preceding gene: 103487272

Following gene: 103487277

Centisome position: 56.46

GC content: 71.39

Gene sequence:

>783_bases
TTGCCGCCAGATGCCAATTTCCTGGCGCCGATCATCGCAGAAACGCTGCTCGACCGGCTGGCGATGGTAACGCGCGATTT
TGCGCGCACGCTGCTCATCGGCGCGCACGACGCGGCCCTCACCGACCATCTGCGCGCGACCGGCACCGAGCTTTGCATCG
TCGAGGCTGCGCCGCGCCTCGCCGCGCGCACAGGCGCGATCGCGATCGAAGCTGATGCGATCGACCTGCCGTTCGAGAGC
TTCGACCTCATCGTCTGGCCCGGCGGGCTCGACAGCATCAATGATGTGCCCGGCGCGCTGCTGCGCCTTCGCGCGCTGCT
TGCGCCCGACGGGCTGCTGCTCGGCGCCTTTGTCGGCGACGGCAGCCTGCCCCGGCTGCGCCGCGCGATGATGGCGGACG
GTGTCCGCCCGGTCGCGCGGATGCACCCGCAGATCGACCTTGCGGCGATGGGCAATCTGCTCCAGCGCGTCGGCTTTGCG
TTGCCGGTCGTCGACGTCGAGGCTCTGACGGTGCGCTATAATGACTGGTTTGCGCTGGTGCGCGACCTGCGCGCCGCGGG
CCTGTCGAACCGCCTCGATCCCGCGCCGCCGCCACTGACGCGCGACGAAGCGGGGCGCATCGCCGCCGCCTTCGCCGCCG
CCGCCGACCCCGACGGCCGCATCGCCGAGGCGTTTCGACTCGTTTATTTCAGCGGCTGGGCGCCGCACCCCAACCAGCCG
CAGCCCGCGCGGCGCGGCAGCGGCACGGCCTCGCTGGCAGCGGCGCTGAAGCCGAAACCCTAG

Upstream 100 bases:

>100_bases
GAAGCATCGCCGGGGACGGCACAAGCGGCGCATGTCGCAGTCACCCCGTCCGCTCTTTTCCCCTGCCCGCGACCGGGCGC
AGCGCGATCGGCTGGCACGC

Downstream 100 bases:

>100_bases
CTAGATCAACGCTTCCAGCAATCCGATCAACGGCTTGTCGGCGGGCGGCATCGGAAGCGCGTGAAGCTCGACCGGACGCA
CCCAGTCTAGCGCGCTTGCA

Product: methyltransferase type 12

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPPDANFLAPIIAETLLDRLAMVTRDFARTLLIGAHDAALTDHLRATGTELCIVEAAPRLAARTGAIAIEADAIDLPFES
FDLIVWPGGLDSINDVPGALLRLRALLAPDGLLLGAFVGDGSLPRLRRAMMADGVRPVARMHPQIDLAAMGNLLQRVGFA
LPVVDVEALTVRYNDWFALVRDLRAAGLSNRLDPAPPPLTRDEAGRIAAAFAAAADPDGRIAEAFRLVYFSGWAPHPNQP
QPARRGSGTASLAAALKPKP

Sequences:

>Translated_260_residues
MPPDANFLAPIIAETLLDRLAMVTRDFARTLLIGAHDAALTDHLRATGTELCIVEAAPRLAARTGAIAIEADAIDLPFES
FDLIVWPGGLDSINDVPGALLRLRALLAPDGLLLGAFVGDGSLPRLRRAMMADGVRPVARMHPQIDLAAMGNLLQRVGFA
LPVVDVEALTVRYNDWFALVRDLRAAGLSNRLDPAPPPLTRDEAGRIAAAFAAAADPDGRIAEAFRLVYFSGWAPHPNQP
QPARRGSGTASLAAALKPKP
>Mature_259_residues
PPDANFLAPIIAETLLDRLAMVTRDFARTLLIGAHDAALTDHLRATGTELCIVEAAPRLAARTGAIAIEADAIDLPFESF
DLIVWPGGLDSINDVPGALLRLRALLAPDGLLLGAFVGDGSLPRLRRAMMADGVRPVARMHPQIDLAAMGNLLQRVGFAL
PVVDVEALTVRYNDWFALVRDLRAAGLSNRLDPAPPPLTRDEAGRIAAAFAAAADPDGRIAEAFRLVYFSGWAPHPNQPQ
PARRGSGTASLAAALKPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=265, Percent_Identity=28.6792452830189, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI86792933, Length=259, Percent_Identity=25.4826254826255, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17535003, Length=178, Percent_Identity=28.0898876404494, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19922210, Length=265, Percent_Identity=29.811320754717, Blast_Score=114, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27635; Mature: 27504

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPDANFLAPIIAETLLDRLAMVTRDFARTLLIGAHDAALTDHLRATGTELCIVEAAPRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHH
AARTGAIAIEADAIDLPFESFDLIVWPGGLDSINDVPGALLRLRALLAPDGLLLGAFVGD
HHHCCCEEEECCCEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
GSLPRLRRAMMADGVRPVARMHPQIDLAAMGNLLQRVGFALPVVDVEALTVRYNDWFALV
CCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHHHH
RDLRAAGLSNRLDPAPPPLTRDEAGRIAAAFAAAADPDGRIAEAFRLVYFSGWAPHPNQP
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCC
QPARRGSGTASLAAALKPKP
CCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
PPDANFLAPIIAETLLDRLAMVTRDFARTLLIGAHDAALTDHLRATGTELCIVEAAPRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHH
AARTGAIAIEADAIDLPFESFDLIVWPGGLDSINDVPGALLRLRALLAPDGLLLGAFVGD
HHHCCCEEEECCCEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
GSLPRLRRAMMADGVRPVARMHPQIDLAAMGNLLQRVGFALPVVDVEALTVRYNDWFALV
CCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHHHH
RDLRAAGLSNRLDPAPPPLTRDEAGRIAAAFAAAADPDGRIAEAFRLVYFSGWAPHPNQP
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCCCCC
QPARRGSGTASLAAALKPKP
CCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]