| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487249
Identifier: 103487249
GI number: 103487249
Start: 1861278
End: 1861526
Strand: Direct
Name: 103487249
Synonym: Sala_1764
Alternate gene names: NA
Gene position: 1861278-1861526 (Clockwise)
Preceding gene: 103487247
Following gene: 103487252
Centisome position: 55.64
GC content: 72.69
Gene sequence:
>249_bases GTGCCGCTCGTCTCCGGCCCGATCCGCCGCGTGGTGCCGATCGAGGCGCAGGATACGGCGTTTCTCCGCCGCCATTCGAC GCGGCCAGTGCAATTCACCCTGCCCGGCCCCTGCACGATGACGCCGAGTTTCCGGATCAGTTTGAGCTTCGGCGCCGGGG CGATGGCGCGCCCGATCGCCCCCGATTCGGGCAGGACCCCGGCCGCGACGGTCGGGCGCCCCCCGAATCCCGGAGCGAGC GACCCGTGA
Upstream 100 bases:
>100_bases GACCGACTGAAGGCCAGCCCGCCGCCGCGCGACCGCGCTGTCGGGGATCGACCGTGAAAAGCATGGCGCCGCGATCGACC GCACGGGCAATGCCAATCCG
Downstream 100 bases:
>100_bases CCGATGCGATACGCGACGTCATGCCGATGTCCTTTTCCATTGGGCGACCACGACGTCGACCGGCTGCGGCCCGAGCAGCC ACGCGCGCACCTGTTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPLVSGPIRRVVPIEAQDTAFLRRHSTRPVQFTLPGPCTMTPSFRISLSFGAGAMARPIAPDSGRTPAATVGRPPNPGAS DP
Sequences:
>Translated_82_residues MPLVSGPIRRVVPIEAQDTAFLRRHSTRPVQFTLPGPCTMTPSFRISLSFGAGAMARPIAPDSGRTPAATVGRPPNPGAS DP >Mature_81_residues PLVSGPIRRVVPIEAQDTAFLRRHSTRPVQFTLPGPCTMTPSFRISLSFGAGAMARPIAPDSGRTPAATVGRPPNPGASD P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8608; Mature: 8477
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSGPIRRVVPIEAQDTAFLRRHSTRPVQFTLPGPCTMTPSFRISLSFGAGAMARPIA CCCCCCCCCEEEECCCCCCHHHHHCCCCCEEEECCCCCEECCCEEEEEEECCCCCCCCCC PDSGRTPAATVGRPPNPGASDP CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLVSGPIRRVVPIEAQDTAFLRRHSTRPVQFTLPGPCTMTPSFRISLSFGAGAMARPIA CCCCCCCCEEEECCCCCCHHHHHCCCCCEEEECCCCCEECCCEEEEEEECCCCCCCCCC PDSGRTPAATVGRPPNPGASDP CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA