| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487175
Identifier: 103487175
GI number: 103487175
Start: 1779730
End: 1780533
Strand: Direct
Name: 103487175
Synonym: Sala_1690
Alternate gene names: NA
Gene position: 1779730-1780533 (Clockwise)
Preceding gene: 103487174
Following gene: 103487176
Centisome position: 53.2
GC content: 67.41
Gene sequence:
>804_bases ATGGACTGGCTGCGCGTCCATCGCGGCGACGCGCCGCTCGTCATCGCCTTTCCGCACGGCGGCACCGAGCTTGCGGGGCT CGACGAGCGGTTCGTGTCGCCCTGGCATGCGCAGATCGACACCGACTGGTGGATCACCGACCTTTACGCCTTCGCCGCCG ACATGGGCGCGACCCTGGTGGCGACCGACATTTCGCGCAGCGTGATCGACATGAACCGCGACCCGTCGGGCGCCTCGCTC TATCCGGGGCAGGCGACAACCGAATTGTGTCCGACCACGACTTTCGACGGCGAGCCGCTTTACCGTTTCGACCTGCCCGA CGAGGCGGAGATCATGCAGCGGCTCAACCTCTATCACCGCCCCTATCACGAGGCGCTGACCGCCGAGCTCGACCGGCTGC GGGCGGCCCATGGCAAAGTCGTCCTTTACGACGCCCATTCGATCCGCAGCCACGTCCCGCGCCTGTTCGACGGCGAACTG CCGCAGTTCAACATCGGCACCAACGGGGGCGCCACCTGCGCGCCCGAACTCGAAACCATCGCCGCGAACATCTGTGCGGC GAGCGGCCACAGCCATGTCGTCAACGGCCGCTTCAAGGGCGGCTGGACGACGCGCCACTATGGCCATCCCGACGAGGGAA CCCATGCGATCCAGATGGAGCTGGCCCAGCGCGGCTATATGGCCGAGCCCGCCGCGATCACCCACGCCAACTGGCCCACC CCCCTCGACCCCAACCCGACGATCCGGCCCGTGCTGGAGCAGGTGATCGCCGCCACGCTCGACTTTGCGAAAGGACGACC ATGA
Upstream 100 bases:
>100_bases ACGACCGGCATTTCCACCCCGACATGGAAGCCGCGACGGCATTGATCCGTTCGGGCAGCCTCGTCGCCGCGGTGCCGGCC AGCCTGCCGGGCGTCGGCTG
Downstream 100 bases:
>100_bases CCCGCCTCGATAACAGCCGCGTGATCCGCCCGGCGACCGGCCCGGAGATCAGCGCGAAAAGCTGGCTTACCGAAGCCCCG ATGCGGATGCTGATGAACAA
Product: N-formylglutamate amidohydrolase
Products: L-glutamate; formamide
Alternate protein names: N-Formylglutamate Deformylase; N-Formylglutamate Amidohydrolase Family Protein; Hydrolase; N-Formylglutamate Amidohydrolase Superfamily; Formiminoglutamase; Formylglutamate Amidohydrolase; Formiminoglutamase Protein; N-Formylglutamate Amidohydrolase Family; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; Histidine Degradation; HutG Protein; N-Formylglutamate Deformylase Family Protein; Formylglutamte Amindohyrolase; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLVATDISRSVIDMNRDPSGASL YPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHRPYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGEL PQFNIGTNGGATCAPELETIAANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT PLDPNPTIRPVLEQVIAATLDFAKGRP
Sequences:
>Translated_267_residues MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLVATDISRSVIDMNRDPSGASL YPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHRPYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGEL PQFNIGTNGGATCAPELETIAANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT PLDPNPTIRPVLEQVIAATLDFAKGRP >Mature_267_residues MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLVATDISRSVIDMNRDPSGASL YPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHRPYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGEL PQFNIGTNGGATCAPELETIAANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT PLDPNPTIRPVLEQVIAATLDFAKGRP
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.3.8
Molecular weight: Translated: 29453; Mature: 29453
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLV CCCCEEECCCCCEEEEECCCCCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCCEEE ATDISRSVIDMNRDPSGASLYPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHR EHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC PYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGELPQFNIGTNGGATCAPELETI CHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCHHHCCCCCEEEECCCCCCCCCCHHHHH AANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT HHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC PLDPNPTIRPVLEQVIAATLDFAKGRP CCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLV CCCCEEECCCCCEEEEECCCCCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCCEEE ATDISRSVIDMNRDPSGASLYPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHR EHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC PYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGELPQFNIGTNGGATCAPELETI CHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCHHHCCCCCEEEECCCCCCCCCCHHHHH AANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT HHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC PLDPNPTIRPVLEQVIAATLDFAKGRP CCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-formimidoyl-L-glutamate; H2O
Specific reaction: N-formimidoyl-L-glutamate + H2O = L-glutamate + formamide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA