Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103487175

Identifier: 103487175

GI number: 103487175

Start: 1779730

End: 1780533

Strand: Direct

Name: 103487175

Synonym: Sala_1690

Alternate gene names: NA

Gene position: 1779730-1780533 (Clockwise)

Preceding gene: 103487174

Following gene: 103487176

Centisome position: 53.2

GC content: 67.41

Gene sequence:

>804_bases
ATGGACTGGCTGCGCGTCCATCGCGGCGACGCGCCGCTCGTCATCGCCTTTCCGCACGGCGGCACCGAGCTTGCGGGGCT
CGACGAGCGGTTCGTGTCGCCCTGGCATGCGCAGATCGACACCGACTGGTGGATCACCGACCTTTACGCCTTCGCCGCCG
ACATGGGCGCGACCCTGGTGGCGACCGACATTTCGCGCAGCGTGATCGACATGAACCGCGACCCGTCGGGCGCCTCGCTC
TATCCGGGGCAGGCGACAACCGAATTGTGTCCGACCACGACTTTCGACGGCGAGCCGCTTTACCGTTTCGACCTGCCCGA
CGAGGCGGAGATCATGCAGCGGCTCAACCTCTATCACCGCCCCTATCACGAGGCGCTGACCGCCGAGCTCGACCGGCTGC
GGGCGGCCCATGGCAAAGTCGTCCTTTACGACGCCCATTCGATCCGCAGCCACGTCCCGCGCCTGTTCGACGGCGAACTG
CCGCAGTTCAACATCGGCACCAACGGGGGCGCCACCTGCGCGCCCGAACTCGAAACCATCGCCGCGAACATCTGTGCGGC
GAGCGGCCACAGCCATGTCGTCAACGGCCGCTTCAAGGGCGGCTGGACGACGCGCCACTATGGCCATCCCGACGAGGGAA
CCCATGCGATCCAGATGGAGCTGGCCCAGCGCGGCTATATGGCCGAGCCCGCCGCGATCACCCACGCCAACTGGCCCACC
CCCCTCGACCCCAACCCGACGATCCGGCCCGTGCTGGAGCAGGTGATCGCCGCCACGCTCGACTTTGCGAAAGGACGACC
ATGA

Upstream 100 bases:

>100_bases
ACGACCGGCATTTCCACCCCGACATGGAAGCCGCGACGGCATTGATCCGTTCGGGCAGCCTCGTCGCCGCGGTGCCGGCC
AGCCTGCCGGGCGTCGGCTG

Downstream 100 bases:

>100_bases
CCCGCCTCGATAACAGCCGCGTGATCCGCCCGGCGACCGGCCCGGAGATCAGCGCGAAAAGCTGGCTTACCGAAGCCCCG
ATGCGGATGCTGATGAACAA

Product: N-formylglutamate amidohydrolase

Products: L-glutamate; formamide

Alternate protein names: N-Formylglutamate Deformylase; N-Formylglutamate Amidohydrolase Family Protein; Hydrolase; N-Formylglutamate Amidohydrolase Superfamily; Formiminoglutamase; Formylglutamate Amidohydrolase; Formiminoglutamase Protein; N-Formylglutamate Amidohydrolase Family; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; Histidine Degradation; HutG Protein; N-Formylglutamate Deformylase Family Protein; Formylglutamte Amindohyrolase; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLVATDISRSVIDMNRDPSGASL
YPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHRPYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGEL
PQFNIGTNGGATCAPELETIAANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT
PLDPNPTIRPVLEQVIAATLDFAKGRP

Sequences:

>Translated_267_residues
MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLVATDISRSVIDMNRDPSGASL
YPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHRPYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGEL
PQFNIGTNGGATCAPELETIAANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT
PLDPNPTIRPVLEQVIAATLDFAKGRP
>Mature_267_residues
MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLVATDISRSVIDMNRDPSGASL
YPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHRPYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGEL
PQFNIGTNGGATCAPELETIAANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT
PLDPNPTIRPVLEQVIAATLDFAKGRP

Specific function: Unknown

COG id: COG3741

COG function: function code E; N-formylglutamate amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.3.8

Molecular weight: Translated: 29453; Mature: 29453

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLV
CCCCEEECCCCCEEEEECCCCCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCCEEE
ATDISRSVIDMNRDPSGASLYPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHR
EHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC
PYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGELPQFNIGTNGGATCAPELETI
CHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCHHHCCCCCEEEECCCCCCCCCCHHHHH
AANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT
HHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC
PLDPNPTIRPVLEQVIAATLDFAKGRP
CCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDWLRVHRGDAPLVIAFPHGGTELAGLDERFVSPWHAQIDTDWWITDLYAFAADMGATLV
CCCCEEECCCCCEEEEECCCCCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCCEEE
ATDISRSVIDMNRDPSGASLYPGQATTELCPTTTFDGEPLYRFDLPDEAEIMQRLNLYHR
EHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC
PYHEALTAELDRLRAAHGKVVLYDAHSIRSHVPRLFDGELPQFNIGTNGGATCAPELETI
CHHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCHHHCCCCCEEEECCCCCCCCCCHHHHH
AANICAASGHSHVVNGRFKGGWTTRHYGHPDEGTHAIQMELAQRGYMAEPAAITHANWPT
HHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC
PLDPNPTIRPVLEQVIAATLDFAKGRP
CCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-formimidoyl-L-glutamate; H2O

Specific reaction: N-formimidoyl-L-glutamate + H2O = L-glutamate + formamide

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA