| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487137
Identifier: 103487137
GI number: 103487137
Start: 1735286
End: 1735546
Strand: Direct
Name: 103487137
Synonym: Sala_1652
Alternate gene names: NA
Gene position: 1735286-1735546 (Clockwise)
Preceding gene: 103487135
Following gene: 103487138
Centisome position: 51.87
GC content: 66.67
Gene sequence:
>261_bases ATGACCGACCGCCTGAAACGTCTCAAGTTCCGCGCCTGGCACCGCGGCACGCGCGAGGCCGACTATATGATCGGCGGCTT CTTCGACCGCTATTCGCCCGCCTGGGGCGAAACTGAACTCGCATGGTTCGAGGCCGTGGTCGAGGAGGATGACGTCGACA TCATGGCGTGGGCGCTCGGCACCGCCGCGCCGCCCGCGCATCTCGACAAGCCCGACCTGATCGCGGCGATGCGCCGGCTG GACTATATCCCGCTGCCATGA
Upstream 100 bases:
>100_bases CTCGCCATGCGGGCGCTCACCCTCATCCAACTTCGCCTGGCCGCAAAGCGGCAAGGCTTCGTATCCTTCTCCCATTAAGC GAGAAGGGAAAGAGAAACAG
Downstream 100 bases:
>100_bases CCCGAAGCGCCGCCGACATTCTTGCCGCGATCGCATCGGCCGCGGCGCCGCTGACGCTGGCGCGCGCCGCCGACGGTTTC CTGCCGCTGCTGCTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTDRLKRLKFRAWHRGTREADYMIGGFFDRYSPAWGETELAWFEAVVEEDDVDIMAWALGTAAPPAHLDKPDLIAAMRRL DYIPLP
Sequences:
>Translated_86_residues MTDRLKRLKFRAWHRGTREADYMIGGFFDRYSPAWGETELAWFEAVVEEDDVDIMAWALGTAAPPAHLDKPDLIAAMRRL DYIPLP >Mature_85_residues TDRLKRLKFRAWHRGTREADYMIGGFFDRYSPAWGETELAWFEAVVEEDDVDIMAWALGTAAPPAHLDKPDLIAAMRRLD YIPLP
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9952; Mature: 9821
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLKRLKFRAWHRGTREADYMIGGFFDRYSPAWGETELAWFEAVVEEDDVDIMAWALG CCCHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECC TAAPPAHLDKPDLIAAMRRLDYIPLP CCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TDRLKRLKFRAWHRGTREADYMIGGFFDRYSPAWGETELAWFEAVVEEDDVDIMAWALG CCHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECC TAAPPAHLDKPDLIAAMRRLDYIPLP CCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA