Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487099

Identifier: 103487099

GI number: 103487099

Start: 1695219

End: 1695794

Strand: Direct

Name: 103487099

Synonym: Sala_1614

Alternate gene names: NA

Gene position: 1695219-1695794 (Clockwise)

Preceding gene: 103487098

Following gene: 103487100

Centisome position: 50.68

GC content: 65.28

Gene sequence:

>576_bases
ATGACGGTCGTGGTCGCGATCGCCATCGCTACCGCGCTGTTTGCCGGTGGCTTTGCCGGTTTCAATGAGGCACGGATCGA
GGCGGGAGACGCGGCCGTCGCGACATGGGCGGCACCGCTGATCGTCGTCGCGCTCGGCGTCGCCGCGCTCGGCCTTTACG
TCCGGCGCCACGCCGACGGCTTTCGCACCTGGTCGCAGCGCAAGCGGCTCTATTGGGCAAGCCTGCTCTTTTCGGGTGTG
ATCGGCATGGTCGCCGCGATGCTGTTGCAGGAAGGACCCGGCGACGGGCTGATGAGCAACGAGGCGCTGTCGCCCAATGT
GGCGATCGGCCTGTCGCTGCTGTGGGTCGTCGGGCTGGTGATCGCGCTCGCCCTTTATCACCGCGCGGTCGACGATCATG
AGCGCCATGCCTATCATCAGGCGTCACTTGCGGGTTTCTACGCCTTCATCTTCCCCTGCCCCGTCTGGTGGGTGTTGTGG
CGCGCCGACTTGGCGCCGCCGGTCGATGCCATGGCGCTTTTCGGTCTCGTTCTGATCGTCAACGCCGCCGTCTATCTCTG
GTTCAAGTTTCGCTGA

Upstream 100 bases:

>100_bases
CTGGCGCGGCTGTTCGACATGCCGATCGAGGAGATTTTCGACGATGGCCACAAGGGACAGGACGATGGCGAATGACACCG
GCAAATCCACCGCGCCGTCG

Downstream 100 bases:

>100_bases
CAGCTTTCCGCTTTCCCCCTCTGCACGCTTCGGGCCATAAGCGGCCCCATGAAAGGCAACGCCCCATGACGACCTGGTTC
AAGATTCTCGCCTCCAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTVVVAIAIATALFAGGFAGFNEARIEAGDAAVATWAAPLIVVALGVAALGLYVRRHADGFRTWSQRKRLYWASLLFSGV
IGMVAAMLLQEGPGDGLMSNEALSPNVAIGLSLLWVVGLVIALALYHRAVDDHERHAYHQASLAGFYAFIFPCPVWWVLW
RADLAPPVDAMALFGLVLIVNAAVYLWFKFR

Sequences:

>Translated_191_residues
MTVVVAIAIATALFAGGFAGFNEARIEAGDAAVATWAAPLIVVALGVAALGLYVRRHADGFRTWSQRKRLYWASLLFSGV
IGMVAAMLLQEGPGDGLMSNEALSPNVAIGLSLLWVVGLVIALALYHRAVDDHERHAYHQASLAGFYAFIFPCPVWWVLW
RADLAPPVDAMALFGLVLIVNAAVYLWFKFR
>Mature_190_residues
TVVVAIAIATALFAGGFAGFNEARIEAGDAAVATWAAPLIVVALGVAALGLYVRRHADGFRTWSQRKRLYWASLLFSGVI
GMVAAMLLQEGPGDGLMSNEALSPNVAIGLSLLWVVGLVIALALYHRAVDDHERHAYHQASLAGFYAFIFPCPVWWVLWR
ADLAPPVDAMALFGLVLIVNAAVYLWFKFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20685; Mature: 20553

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVVAIAIATALFAGGFAGFNEARIEAGDAAVATWAAPLIVVALGVAALGLYVRRHADG
CHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRTWSQRKRLYWASLLFSGVIGMVAAMLLQEGPGDGLMSNEALSPNVAIGLSLLWVVGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IALALYHRAVDDHERHAYHQASLAGFYAFIFPCPVWWVLWRADLAPPVDAMALFGLVLIV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NAAVYLWFKFR
HHHHHHHEECC
>Mature Secondary Structure 
TVVVAIAIATALFAGGFAGFNEARIEAGDAAVATWAAPLIVVALGVAALGLYVRRHADG
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRTWSQRKRLYWASLLFSGVIGMVAAMLLQEGPGDGLMSNEALSPNVAIGLSLLWVVGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IALALYHRAVDDHERHAYHQASLAGFYAFIFPCPVWWVLWRADLAPPVDAMALFGLVLIV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NAAVYLWFKFR
HHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA